BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15552 (UTR included)
(2485 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01008X1C10 1386 0.0
>BF01008X1C10
Length = 721
Score = 1386 bits (699), Expect = 0.0
Identities = 715/721 (99%)
Strand = Plus / Plus
Query: 503 gacgtaccgtgtgttttttagttttttaatattaggcttgctaagtgtatgcggacagca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacgtaccgtgtgttttttagttttttaatattaggcttgctaagtgtatgcggacagca 60
Query: 563 atttaactcaccctgtccagattactttggttatagacaagactcggggggcatatacgg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttaactcaccctgtccagattactttggttatagacaagactcggggggcatatacgg 120
Query: 623 tttaattaccataaagtcatttggagttgtgtcttctttactagttcgagctaattttac 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttaattaccataaagtcatttggagttgtgtcttctttactagttcgagctaattttac 180
Query: 683 tattgcaggaagattgccatccacatatgcgggtagcctccaacctatcggaacagagct 742
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 tattgcaggaagattgccatccacgtatgcgggtagcctccaacctatcggaacagagct 240
Query: 743 ataccttctgcgtgacttcaataggggaaagactttggaatacagggttagcttcccagt 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataccttctgcgtgacttcaataggggaaagactttggaatacagggttagcttcccagt 300
Query: 803 cgtgtctcctttaccccgactgacttccatctcagtcaacgataaattagtctgttatgg 862
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtgtctcctttaccgcgactgacttccatctcagtcaacgataaattagtctgttatgg 360
Query: 863 acctggagactctatcggcgaggttcaatacatcactacgataagcttgcagcacatgct 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctggagactctatcggcgaggttcaatacatcactacgataagcttgcagcacatgct 420
Query: 923 tttctacaagaccggcactcaggggatttacggacacgatacaaaattagctgaacagtt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttctacaagaccggcactcaggggatttacggacacgatacaaaattagctgaacagtt 480
Query: 983 gcctgccacattacctcatactaatgacgtgaatccatttacaattgacaactcaaagcc 1042
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 gcctgccacattacctcatactaatgacgtgaatccatttacaattgacaattcaaagcc 540
Query: 1043 ggtttatgtacctcccaaaccgctaacaccagccccggttcctgaatatgttgtcacagc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtttatgtacctcccaaaccgctaacaccagccccggttcctgaatatgttgtcacagc 600
Query: 1103 gacccctgcgacacgccgaccaccacgccccgaacccgatcctctgtcaattaaaccgga 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacccctgcgacacgccgaccaccacgccccgaacccgatcctctgtcaattaaaccgga 660
Query: 1163 accgcagagcacaaaatgtggtatcaatagtaagaacgataacccagacgccatacctgc 1222
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 661 accgcagnncacaaaatgtggtatcaatagtaagaacgataacccagacgctatacctgc 720
Query: 1223 g 1223
|
Sbjct: 721 g 721
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,667
Number of extensions: 9356
Number of successful extensions: 9356
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9356
Number of HSP's successfully gapped: 1
Length of query: 2485
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2468
Effective length of database: 8,119,229
Effective search space: 20038257172
Effective search space used: 20038257172
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)