BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN09636 (UTR included)
         (1771 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01013B1E07                                                          131   4e-30
BF14_335_C4                                                            72   3e-12

>BF01013B1E07
          Length = 810

 Score =   bits (66), Expect = 4e-30
 Identities = 81/86 (94%)
 Strand = Plus / Minus

                                                                      
Query: 3  aatttcgagatacataaatatattttgttagacggaaaggccggctacatagccttttag 62
          |||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 86 aatttcgacatacataaatgtattttgttaggcggaaaggccggctgcatagccttttag 27

                                    
Query: 63 aactatatcttcaccaatattcattt 88
          ||||||||||| ||||||||||||||
Sbjct: 26 aactatatctttaccaatattcattt 1


>BF14_335_C4
          Length = 1491

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1632 gttagttagagagaggggcttagaaagtggagctgagcgtttaatgaatgttagataggg 1691
            ||||| |||||||||| |||| |||||| ||| |||||||||||||   || |||||  |
Sbjct: 1187 gttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaag 1246

                                                                    
Query: 1692 gctccttgtacctacacctgggtcacaagtccccggcgctattagagctcctctcc 1747
            || ||||  ||||||||||||||| |||||||| ||| || ||  |||||||||||
Sbjct: 1247 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,554
Number of extensions: 5657
Number of successful extensions: 5657
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5656
Number of HSP's successfully gapped: 2
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)