BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15563 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1558_C1 2496 0.0
>BF14_1558_C1
Length = 1272
Score = 2496 bits (1259), Expect = 0.0
Identities = 1268/1271 (99%)
Strand = Plus / Plus
Query: 303 ctctgaacacgtcgcgctagggatctcccctcatttgaaatgcgtttcttatatctctat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctctgaacacgtcgcgctagggatctcccctcatttgaaatgcgtttcttatatctctat 61
Query: 363 atattcctacacgtctgctatgcaacaatcgacgattacaatgcgaaacgagcccagatc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atattcctacacgtctgctatgcaacaatcgacgattacaatgcgaaacgagcccagatc 121
Query: 423 ctcagagatgaggccctcttatctctagggggagacactcagctcacagataaagagcta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctcagagatgaggccctcttatctctagggggagacactcagctcacagataaagagcta 181
Query: 483 gccgtaaacaactgtctaatgcaacacaagttccgtgaagtagactacggttataacaat 542
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gccgtcaacaactgtctaatgcaacacaagttccgtgaagtagactacggttataacaat 241
Query: 543 ccgcaagcattcaacttctcacatcatttcttcttgtacaataataatataaataaatct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccgcaagcattcaacttctcacatcatttcttcttgtacaataataatataaataaatct 301
Query: 603 aaagcttaccagatcattaaggacataccaaagggagcggcgcttcatattcacgatatg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaagcttaccagatcattaaggacataccaaagggagcggcgcttcatattcacgatatg 361
Query: 663 ggaattttgggacccgattacatcatgcgcctgacatatatggatcatctctatacctgt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggaattttgggacccgattacatcatgcgcctgacatatatggatcatctctatacctgt 421
Query: 723 tttggtttacgtgacatacaatttaaattttcctttaaaaggccacaaacgttatgtgat 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttggtttacgtgacatacaatttaaattttcctttaaaaggccacaaacgttatgtgat 481
Query: 783 ggcaggtggcagttacttaaggatgttcgagacaacttcaatgatacaaccacattcgat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggcaggtggcagttacttaaggatgttcgagacaacttcaatgatacaaccacattcgat 541
Query: 843 gcacatttaaggcaatatttcactatgcgtgtcgacaaccctgacatgatgtatccaacc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcacatttaaggcaatatttcactatgcgtgtcgacaaccctgacatgatgtatccaacc 601
Query: 903 atcaaagaatcatggggaacttttatgaaatactttagtacagtcattcaaatactcaca 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atcaaagaatcatggggaacttttatgaaatactttagtacagtcattcaaatactcaca 661
Query: 963 tacaggccagtgtgggagcaatacttttacgacgtgctcctgaagtttagattggataat 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tacaggccagtgtgggagcaatacttttacgacgtgctcctgaagtttagattggataat 721
Query: 1023 gttatgtatattgaactgagaagtattttaccaaatttgtacgatttggatgggacagtt 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gttatgtatattgaactgagaagtattttaccaaatttgtacgatttggatgggacagtt 781
Query: 1083 tattcaccaataataacagcgaagacatacaacaaggtaataaagaaattcaagagagag 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tattcaccaataataacagcgaagacatacaacaaggtaataaagaaattcaagagagag 841
Query: 1143 tacccagattttttcggtgcgaaacttatttacgcaccatctagaaaaattgagaggatt 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tacccagattttttcggtgcgaaacttatttacgcaccatctagaaaaattgagaggatt 901
Query: 1203 caattggataaatatttaaatctagccagaactttgaaggctgacatgccggatttattt 1262
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 902 caattggataaatatttaaacctagccagaactttgaaggctgacatgccggatttattt 961
Query: 1263 gcgggatttgatctggtcggtcaggaggacttgggcagtcctttaatagagttcataccg 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gcgggatttgatctggtcggtcaggaggacttgggcagtcctttaatagagttcataccg 1021
Query: 1323 caattattatctgcctccaaggaactgaactacttctttcacgccggcgaaactaattgg 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 caattattatctgcctccaaggaactgaactacttctttcacgccggcgaaactaattgg 1081
Query: 1383 tacggcacattgacggatgaaaatcttatagacgctatcttgttgggagctaaaaggtta 1442
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 tacgggacattgacggatgaaaatcttatagacgctatcttgttgggagctaaaaggtta 1141
Query: 1443 ggtcacgcgtacggtattatcaagcatccgttattaatgaaagccgttaaagataaagga 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 ggtcacgcgtacggtattatcaagcatccgttattaatgaaagccgttaaagataaagga 1201
Query: 1503 atcggtatagaagtgaatgtcatatcaaataatgttctgtcattggtacacgatgtccgc 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 atcggtatagaagtgaatgtcatatcaaataatgttctgtcattggtacacgatgtccgc 1261
Query: 1563 aatcatccgct 1573
|||||||||||
Sbjct: 1262 aatcatccgct 1272
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,319
Number of extensions: 5316
Number of successful extensions: 5316
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5316
Number of HSP's successfully gapped: 1
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)