BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16775 (UTR included)
(1930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_87_C1 1740 0.0
>BF14_87_C1
Length = 912
Score = 1740 bits (878), Expect = 0.0
Identities = 887/890 (99%)
Strand = Plus / Plus
Query: 472 gtttagtcgtaactcaaataaacgcaacgatgtcgggaggattagacatactagccctca 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gtttagtcgtaactcaaataaacgcaacgatgtcgggaggattagacatactagccctca 82
Query: 532 acgaggaagatgtaaccaaaatgttggcggcgacaacccatttggggtccgagaatgtcc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 acgaggaagatgtaaccaaaatgttggcggcgacaacccatttggggtccgagaatgtcc 142
Query: 592 acttccagatggaaacctacgtgtacaagcgtcgtgctgatggcacccacgtcatcaacc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 acttccagatggaaacctacgtgtacaagcgtcgtgctgatggcacccacgtcatcaacc 202
Query: 652 ttcgccgtacatgggagaagctagtgttggccgcacgtgcggtagtcgctatcgagaatc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttcgccgtacatgggagaagctagtgttggccgcacgtgcggtagtcgctatcgagaatc 262
Query: 712 ccgcggatatcttcgtgatatcttctcgtcctttcggtcaacgtgccgtgcttaagttcg 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccgcggatatcttcgtgatatcttctcgtcctttcggtcaacgtgccgtgcttaagttcg 322
Query: 772 cagctcacactggagccacacctatcgctggacgtttcacacctggtgccttcaccaacc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cagctcacactggagccacacctatcgctggacgtttcacacctggtgccttcaccaacc 382
Query: 832 agatccaagccgctttccgtgagcctcgtctcttgattgtcttggacccagctcaagatc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agatccaagccgctttccgtgagcctcgtctcttgattgtcttggacccagctcaagatc 442
Query: 892 atcagccgatcaccgaggcttcatatgtgaacattccagtcattgctttctgcaacactg 951
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 atcagccgatcaccgaggcttcatatgtgaacattccagtcattgcgttctgcaacactg 502
Query: 952 actccccactcagatttgttgacattgccatcccctgcaacactaagtcgtcccattcca 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actccccactcagatttgttgacattgccatcccctgcaacactaagtcgtcccattcca 562
Query: 1012 ttggtttgatgtggtggctgttggcacgcgaggttctacgcctgcggggtgtgctagcta 1071
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 563 ttggtttgatgtggtggctgttggcacgcgaggttctacgcctgcgtggtgtgctagcta 622
Query: 1072 gagatcagaagtgggatgttgttgtggacctgttcttctacagagaccctgaggagagcg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gagatcagaagtgggatgttgttgtggacctgttcttctacagagaccctgaggagagcg 682
Query: 1132 agaaggaggaacaacaggctaaggaacaggctgttgtagctgctaaggctgaggaggctg 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agaaggaggaacaacaggctaaggaacaggctgttgtagctgctaaggctgaggaggctg 742
Query: 1192 tgcttcctgtggagtatgtggagccggttgaggctccaactgtatgggctgatgatacac 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgcttcctgtggagtatgtggagccggttgaggctccaactgtatgggctgatgatacac 802
Query: 1252 ctggagcacctgctgctgctgtagccttcaccgccacaccacccaaggaagactgggctg 1311
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctggagcacctgccgctgctgtagccttcaccgccacaccacccaaggaagactgggctg 862
Query: 1312 ctcaggtccaagaggaatggccgaacgcgccaacagcccccgccccggcc 1361
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ctcaggtccaagaggaatggccgaacgcgccaacagcccccgccccggcc 912
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,470
Number of extensions: 5748
Number of successful extensions: 5748
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5748
Number of HSP's successfully gapped: 1
Length of query: 1930
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1913
Effective length of database: 8,119,229
Effective search space: 15532085077
Effective search space used: 15532085077
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)