BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18376 (UTR included)
(1873 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1659_C1 1154 0.0
>BF14_1659_C1
Length = 1190
Score = 1154 bits (582), Expect = 0.0
Identities = 597/602 (99%)
Strand = Plus / Plus
Query: 1272 gtttggctgtcacagctgttccgagacgttcgacattcgtgggccgaagcggaatcctgg 1331
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgcctgtcacagctgttccgagacgttcgacattcgtgggccgaagcggaatcctgg 60
Query: 1332 gagaggaaaatgagacaggccatgacacgacagatgatttaacattgaacatatgccaaa 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaggaaaatgagacaggccatgacacgacagatgatttaacattgaacatatgccaaa 120
Query: 1392 ataacaaaggactgtgtataatttacgttttatacctgtgggatgtgtgtatgtatgtat 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataacaaaggactgtgtataatttacgttttatacctgtgggatgtgtgtatgtatgtat 180
Query: 1452 gtatgtaatatttatgtttttattacacgcgtacgccacgccagctgcgggtaagcatca 1511
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatgtaatatttatgtttttactacacgcgtacgccacgccagctgcgggtaagcatca 240
Query: 1512 cgtattattagttgtgtcgtgttaaacggtccgtcggtttggctgttacctaacatcggt 1571
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtattattagttgtctcgtgttaaacggtccgtcggtttggctgttacctaacatcggt 300
Query: 1572 tcattattttgttagttgcggtgccattttcgcttagtggaaacgcaaaaatcgtatgct 1631
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 tcattaatttgttagttgcggtgccatttttgcttagtggaaacgcaaaaatcgtatgct 360
Query: 1632 gtatggtttgtgattctgtcgtttattttattaagtgctgtcttgtatttaaatgaaacg 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtatggtttgtgattctgtcgtttattttattaagtgctgtcttgtatttaaatgaaacg 420
Query: 1692 gtattaaagttaatttcatcgatcaggttattttgtgtatatatatattttttcatcaat 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtattaaagttaatttcatcgatcaggttattttgtgtatatatatattttttcatcaat 480
Query: 1752 tcaaacaactaaattctcctttgtcaatggccttaacagtccttttatgtacaacttaaa 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaaacaactaaattctcctttgtcaatggccttaacagtccttttatgtacaacttaaa 540
Query: 1812 ccgtcgatgatcttagccaaaacataaagtaggtatcggttaaataactagcggaaggtc 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgtcgatgatcttagccaaaacataaagtaggtatcggttaaataactagcggaaggtc 600
Query: 1872 aa 1873
||
Sbjct: 601 aa 602
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 190,341
Number of extensions: 4236
Number of successful extensions: 4236
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4232
Number of HSP's successfully gapped: 1
Length of query: 1873
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1856
Effective length of database: 8,119,229
Effective search space: 15069289024
Effective search space used: 15069289024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)