BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13557 (UTR included)
(1774 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2651_C1 1487 0.0
BF01058B1D04 930 0.0
>BF14_2651_C1
Length = 874
Score = 1487 bits (750), Expect = 0.0
Identities = 757/760 (99%)
Strand = Plus / Plus
Query: 496 agaacatggctgaacccaatcctcaagcgggagacaccggcccaccgaagggcatcccag 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 agaacatggctgaacccaatcctcaagcgggagacaccggcccaccgaagggcatcccag 174
Query: 556 ctcttaaagcacatgtgatcgccaacaaaatagatgtggccctgtggggtatcagactgc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctcttaaagcacatgtgatcgccaacaaaatagatgtggccctgtggggtatcagactgc 234
Query: 616 tcactgtattatgtactttcggatatgtactgccggtgttcaacaattccgtgtcagctt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcactgtattatgtactttcggatatgtactgccggtgttcaacaattccgtgtcagctt 294
Query: 676 tctacaaggcgctcctcgccaacgcggccacatcagctctgcggctgcaccaacgtatcc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tctacaaggcgctcctcgccaacgcggccacatcagctctgcggctgcaccaacgtatcc 354
Query: 736 cggcgagagagatctctctctcccgggagttcgtcaacaggttcttccttgaagacagcg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cggcgagagagatctctctctcccgggagttcgtcaacaggttcttccttgaagacagcg 414
Query: 796 ctcactaccttttctactcgttgatattcatgaacgtggcgccaaatttgttgatactca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcactaccttttctactcgttgatattcatgaacgtggcgccaaatttgttgatactca 474
Query: 856 cgccgatcttcctattcgctctgttgcacgcggcgtcctactctctcacgatactagaca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cgccgatcttcctattcgctctgttgcacgcggcgtcctactctctcacgatactagaca 534
Query: 916 ccctgggacagaactcgatgtgggtcgctcgtctcctcatctcactggtggagttccagt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ccctgggacagaactcgatgtgggtcgctcgtctcctcatctcactggtggagttccagt 594
Query: 976 ccaggaacatcctgagagtggccgccctcgctgagatcgtgctgttcccgctggtggtct 1035
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 595 ccaggaacatcctgagagtggccgccctcgctgagatcgtgctcttcccgctggtggtct 654
Query: 1036 tcatggcgctagtggggtactgcggcctcatgacgccgttcgtgtactactacttcgtga 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcatggcgctagtggggtactgcggcctcatgacgccgttcgtgtactactacttcgtga 714
Query: 1096 cgtggcgctacacgtcccgccgcaacccctacacccgcaacacgttccgcgagctgcggg 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cgtggcgctacacgtcccgccgcaacccctacacccgcaacacgttccgcgagctgcggg 774
Query: 1156 cggcggcggagcgcgcggcctccaagccggccctgcccggagccctgcgctccgccatcc 1215
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cggcggcggnncgcgcggcctccaagccggccctgcccggagccctgcgctccgccatcc 834
Query: 1216 tcgcggccgtgcagctcgtgtgccgcctcgcgccgcccgc 1255
||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tcgcggccgtgcagctcgtgtgccgcctcgcgccgcccgc 874
>BF01058B1D04
Length = 738
Score = 930 bits (469), Expect = 0.0
Identities = 502/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1263 cagccgcagtgacacggaacagaccacacaaaacacagattcgaggttcacagccacaga 1322
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cagccgcagtgacacggcacagaccacacaaaacacagattcgaggttcacagccacaga 679
Query: 1323 taataaatatttaatatacacacaacaacctgctcgtccgcgacacacgaagacccggac 1382
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 678 taataaatatttaatatacacacaacaacctgtncgtccgcgacacacgaatacccggac 619
Query: 1383 cttatatgactcgccttgtgacccgtcacacacagggagagagatgtcgcatacacaggg 1442
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 618 cttatatgactcgccttgtgacccgtcacacacaggggaagagatgtcgcatacacaggg 559
Query: 1443 tgtccccagtgtggggtgtacagggggcttatgacgtcattgagtcacaaaaaataattc 1502
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 558 tgtccctagtgtggggtgtacaggggt-ttatgacgtcattgagtcacaaaaaataattc 500
Query: 1503 aattgtatttctacactagtgctcgtggactgtgttcgtttgttcgtcttatctttgata 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aattgtatttctacactagtgctcgtggactgtgttcgtttgttcgtcttatctttgata 440
Query: 1563 ggactgtcccaagtttcaaaccgctctggaatcagttcgtctcactctcggtccatcgtc 1622
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 ggactgtcccaagtttcaaaccgctctgtaatcagttcgtctcactctcggtccatcgtc 380
Query: 1623 cgctagcatcctgtgtcgcgagtatttgcaagtattgttaacgggataaaatggtattat 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cgctagcatcctgtgtcgcgagtatttgcaagtattgttaacgggataaaatggtattat 320
Query: 1683 gttaagtttaatttaatttgtgaagcgagcaacgttggtccaatttaagttagatgatag 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gttaagtttaatttaatttgtgaagcgagcaacgttggtccaatttaagttagatgatag 260
Query: 1743 tggaatatattatatacaccgccgccggccga 1774
||||||||||||||||||||||||||||||||
Sbjct: 259 tggaatatattatatacaccgccgccggccga 228
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,217
Number of extensions: 4960
Number of successful extensions: 4960
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4959
Number of HSP's successfully gapped: 2
Length of query: 1774
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1757
Effective length of database: 8,119,229
Effective search space: 14265485353
Effective search space used: 14265485353
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)