BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01735 (UTR included)
(1594 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1712_C1 1689 0.0
>BF14_1712_C1
Length = 874
Score = 1689 bits (852), Expect = 0.0
Identities = 855/856 (99%)
Strand = Plus / Plus
Query: 189 gagttctaataaaaatcttagaagtaataaaatgtgaaacattcaaagaaaatgtaaaac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gagttctaataaaaatcttagaagtaataaaatgtgaaacattcaaagaaaatgtaaaac 78
Query: 249 gttaattattcatggcaaagaaagtaatttaatttaataccttatcggtagcagacaaaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gttaattattcatggcaaagaaagtaatttaatttaataccttatcggtagcagacaaaa 138
Query: 309 acacgatgtctgaaggatatctatttttaattgaaaattaaatatctattacacgtgtta 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 acacgatgtctgaaggatatctatttttaattgaaaattaaatatctattacacgtgtta 198
Query: 369 ggcagttcctggcactacgtcaaatacaaaacattactaactattttaaaatagttttca 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ggcagttcctggcactacgtcaaatacaaaacattactaactattttaaaatagttttca 258
Query: 429 tttataccaaacacgtcgtcgttatataagtgttcttgaatttttaaaacgctttttaaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttataccaaacacgtcgtcgttatataagtgttcttgaatttttaaaacgctttttaaa 318
Query: 489 aattttgcagaaatgtcggttttaagtaaaaatattaaattagtgtttaataaatatcct 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aattttgcagaaatgtcggttttaagtaaaaatattaaattagtgtttaataaatatcct 378
Query: 549 ctgcttcgaggaatggcatcttatggcgtgatttggccaatttctagttttatccaacaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgcttcgaggaatggcatcttatggcgtgatttggccaatttctagttttatccaacaa 438
Query: 609 acatttgaaggaaaatcttttgattcaaataataaatatgactggatgaggtgtgctcga 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acatttgaaggaaaatcttttgattcaaataataaatatgactggatgaggtgtgctcga 498
Query: 669 tatggtttatatggctcatgttatgtggctcctactatatacagctggttcactatagct 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tatggtttatatggctcatgttatgtggctcctactatatacagctggttcactatagct 558
Query: 729 aatattatgtggccaggaagtgcatttaagattgccattatcaagacatttttcgaaaca 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatattatgtggccaggaagtgcatttaagattgccattatcaagacatttttcgaaaca 618
Query: 789 atcacctatactccatttgcaatgtgcagtttttattttgggatgagccttttggagtcc 848
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 619 atcacctatactccatttgcaatgtgcagtttttattttgggatgagtcttttggagtcc 678
Query: 849 aaacctctccatgaagctattgcagaagtacaaaacaagttttggcctacctatcgggtg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaacctctccatgaagctattgcagaagtacaaaacaagttttggcctacctatcgggtg 738
Query: 909 ggagcatctgtgtggccagtagtggctatggtaaatttttaccttatacctccaaaaaac 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggagcatctgtgtggccagtagtggctatggtaaatttttaccttatacctccaaaaaac 798
Query: 969 agggtaccatttatcagtgtttgtagtcttatatggacatgttttcttgcttatatgaag 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agggtaccatttatcagtgtttgtagtcttatatggacatgttttcttgcttatatgaag 858
Query: 1029 catatggaaaaagaaa 1044
||||||||||||||||
Sbjct: 859 catatggaaaaagaaa 874
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,091
Number of extensions: 7059
Number of successful extensions: 7059
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7059
Number of HSP's successfully gapped: 1
Length of query: 1594
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1577
Effective length of database: 8,119,229
Effective search space: 12804024133
Effective search space used: 12804024133
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)