BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18482 (UTR included)
(1705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1F07 1481 0.0
>BF01036X1F07
Length = 790
Score = 1481 bits (747), Expect = 0.0
Identities = 777/790 (98%)
Strand = Plus / Plus
Query: 254 atgaagacctctatataaatcggctattatttaaaatttcttgtgaaatcacacagttta 313
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaagacttctatataaatcggctattatttaaaatttcttgtgaaatcacacagttta 60
Query: 314 ttttgaagaagttaattttttatttattaaaccgatattgatttacatttgctggcacat 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgaagaagttaattttttatttattaaaccgatattgatttacatttgctggcacat 120
Query: 374 ataacaacttctttcaaaataacattctcttagttttaaaccgccactcggacacgtaaa 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataacaacttctttcaaaataacattctcttagttttaaaccgccactcggacacgtaaa 180
Query: 434 taaaacaggattattttattcaaaggacgtcttaataatctttttaatttattattaaaa 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaaacaggattattttattcaaaggacgtcttaataatctttttaatttattattaaaa 240
Query: 494 actcaaaatgttgaaaatattgttccatcttttgggagctattcaatttttctatggctg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actcaaaatgttgaaaatattgttccatcttttgggagctattcaatttttctatggctg 300
Query: 554 ttattatgattatacttacgtaaaaatacctagtacctcgtcggcagtgaccccctttgg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 ttattatgattatacttacgtaaaaatacctagtacctcgtcggcagtgacccccttcgg 360
Query: 614 tggaaaatttaaatacctgacgtacctaaatgcaatgttgcaaacggtctacttcacggt 673
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 tggaaaatttaaatacctgacgtacctaaatgcaatgttgcaaacagtctacttcacggt 420
Query: 674 ggcgttaattaatgatattattgggaccaatgaatcaacgccttcaaataaaccacttgt 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcgttaattaatgatattattgggaccaatgaatcaacgccttcaaataaaccacttgt 480
Query: 734 gagaagaattaaggatactctatttagtgctcttgcttttccattagcaatgtttgttgg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagaagaattaaggatactctatttagtgctcttgcttttccattagcaatgtttgttgg 540
Query: 794 tatttcattttgggctatatatgcagttgacagagaactaattttacctaaggctatgga 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatttcattttgggctatatatgcagttgacagagaactaattttacctaaggctatgga 600
Query: 854 tgcatttttccctacttggttaaatcatgtgatgcattctaatattgtgttgtttacaat 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcatttttccctacttggttaaatcatgtgatgcattctaatattgtgttgtttacaat 660
Query: 914 aatagaaatcaccacatcattcaggatgtatcccggtagacaatttggattatcaattct 973
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 661 aatagaaatcaccacatcattcannatgtatcccggtagnnnntttggattatcaattct 720
Query: 974 atcagcattcatgctcggctacgtaatttgggttcatgtaatttacttcaaaactggaag 1033
|||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 721 atcagcattcatgctcnnctacgtnatttgggttcatgtcatttacttcaaaactggaag 780
Query: 1034 ttgggtgtat 1043
||||||||||
Sbjct: 781 ttgggtgtat 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,934
Number of extensions: 20405
Number of successful extensions: 20405
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20405
Number of HSP's successfully gapped: 1
Length of query: 1705
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1688
Effective length of database: 8,119,229
Effective search space: 13705258552
Effective search space used: 13705258552
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)