BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03209 (UTR included)
(2410 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1E08 1433 0.0
>BF01039B1E08
Length = 758
Score = 1433 bits (723), Expect = 0.0
Identities = 751/759 (98%), Gaps = 1/759 (0%)
Strand = Plus / Plus
Query: 1522 tcgcgtacggtccgtgtgatatgagcggggtcggcggcggtagaatccacgcaacggccg 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcgtacggtccgtgtgatatgagcggggtcggcggcggtagaatccacgcaacggccg 60
Query: 1582 tcaggttgatcagaatatctgtgttgctattgttgataaacatggcggcctgggcgggcc 1641
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcaggttgatcagaatatctgtcttgttattgttgataaacatggcggcctgggcgggcc 120
Query: 1642 tgcgggccggtttcgaggctcggactattattttgataatggcatccgtagtcgcgtttg 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgggccggtttcgaggctcggactattattttgataatggcatccgtagtcgcgtttg 180
Query: 1702 gaacattcctgctgttgagtcctttccccagctgtacgccgccagcgcctctacagtcgg 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacattcctgctgttgagtcctttccccagctgtacgccgccagcgcctctacagtcgg 240
Query: 1762 aaacgacgttgcgcttccccgagtacgtggccccggtcctcactaagcccatagacactc 1821
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 aaacgacgttgcgcttccccgagtacgtggccgcggtcctcactaagcccatagacactc 300
Query: 1822 cgcccacatccgcctcctccacgccggactacggcgcctcctcgccggtagtcaaccttt 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcccacatccgcctcctccacgccggactacggcgcctcctcgccggtagtcaaccttt 360
Query: 1882 cttacaatccagaacctattaacatttaaacttaattcttagctctaactcgctacgaag 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttacaatccagaacctattaacatttaaacttaattcttagctctaactcgctacgaag 420
Query: 1942 tcatatcacgagatggggatatcttccggatatcgaacgcgtgtttttattatacggaaa 2001
||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 421 tcatatcaccagatggggatatcttccggatatccaacgtgtgttcttattatacggaaa 480
Query: 2002 gagttttatggtaatgtaaataaataacacaatactactctgatataataaacatatagt 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagttttatggtaatgtaaataaataacacaatactactctgatataataaacatatagt 540
Query: 2062 ttttagaatgtgcactctaaaatagcaactctacttaactatagtaattttttttttatg 2121
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 ttttagaatgtgcactctaaaatagcaactctacttaactatagtaa-tttttttttatg 599
Query: 2122 gtgataacattttataatagtataattatttttacacgatcgttttatataactcagcta 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgataacattttataatagtataattatttttacacgatcgttttatataactcagcta 659
Query: 2182 tagcttttatatatgttttgtattaaaaattctgtattatcagtgcgaaatgttcaactt 2241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tagcttttatatatgttttgtattaaaaattctgtattatcagtgcgaaatgttcaactt 719
Query: 2242 atatgaatttttaaaaatatctcttactattattcttaa 2280
|||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atatgaatttttaaaaatatctcttactattattcttaa 758
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,832
Number of extensions: 5550
Number of successful extensions: 5550
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5549
Number of HSP's successfully gapped: 1
Length of query: 2410
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2393
Effective length of database: 8,119,229
Effective search space: 19429314997
Effective search space used: 19429314997
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)