BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00557 (UTR included)
(3040 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1E03 1128 0.0
>BF01024B1E03
Length = 709
Score = 1128 bits (569), Expect = 0.0
Identities = 601/611 (98%), Gaps = 3/611 (0%)
Strand = Plus / Plus
Query: 498 agcatggataaagaaacttatgaaacatatgaatacctcgaagctgatagcggcgacaat 557
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 102 agcatggataaagaaacttatgaaacatatgaatacctcgaagctgatagcggagacaat 161
Query: 558 gatacaagcgagttttttgttgtccaaggtgatggaacatttcttagtgtagataggcca 617
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 gatacaagcgagttttttgttgtccaaggtgatggaacatttcttagtg---ataggcca 218
Query: 618 attcaatatgtaagacaagttgaaagtgctaaggataatttggatgagagccagtcctgc 677
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 attcaatatgtaaggcaagttgaaagtgctaaggataatttggatgagagccagtcctgc 278
Query: 678 gctgtctatgatgtcacaccccaacagttttatgttgatgttgatgaatcctccgaactt 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gctgtctatgatgtcacaccccaacagttttatgttgatgttgatgaatcctccgaactt 338
Query: 738 atatcagtttcagaccaatttattctgcctggtggagacaataatccgtactcaaatagt 797
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atatcagtttccgaccaatttattctgcctggtggagacaataatccgtactcaaatagt 398
Query: 798 tttttattacaatcagcttcaaatagcaaggaggatcatgttgaacagatggatgaagac 857
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 399 tttttattacaatcagcttcaaatagcaaagaggatcatgttgaacagatggatgaagac 458
Query: 858 acaatagaggacacaaaagaggatgtagcaagtaccacactatctgaaggaggtagcaat 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acaatagaggacacaaaagaggatgtagcaagtaccacactatctgaaggaggtagcaat 518
Query: 918 aaagctaatggtgattgtactgagataacattaagcgatgaacaatatcaattattgaag 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aaagctaatggtgattgtactgagataacattaagcgatgaacaatatcaattattgaag 578
Query: 978 agaaaaggatggatattattggaaataaatgacaaagtattcttactagatacattagga 1037
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 579 agaaaaggatggatattactggaaataaatgacaaagtgttcttactagatacattagga 638
Query: 1038 ttacacgacataacagcagacgaaaaattaatccagaagctaaagaatgaaattgaagat 1097
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ttacacgacataacagcagatgaaaaattaatccagaagctaaagaatgaaattgaagat 698
Query: 1098 gataacagtga 1108
|||||||||||
Sbjct: 699 gataacagtga 709
Score = 204 bits (103), Expect = 6e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 323 gagtatagatattcatataattgcgatttctctaaattaaaggtttcaagtattaaaaag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtatagatattcatataattgcgatttctctaaattaaaggtttcaagtattaaaaag 60
Query: 383 actttttctttgtttataaccctcattgatggacaaagacaag 425
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actttttctttgtttataaccctcattgatggacaaagacaag 103
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 422,343
Number of extensions: 9084
Number of successful extensions: 9084
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9083
Number of HSP's successfully gapped: 2
Length of query: 3040
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3022
Effective length of database: 8,109,745
Effective search space: 24507649390
Effective search space used: 24507649390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)