BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03983 (UTR included)
(3748 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1G09 1041 0.0
>BF01052B1G09
Length = 785
Score = 1041 bits (525), Expect = 0.0
Identities = 547/555 (98%)
Strand = Plus / Minus
Query: 564 caaaatgtagttaatttcaaactactacatactatattctttattctcgcaagccaatta 623
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 731 caaaatgtagttaatttcaaactactacatnntatattctttattctcgcaagccaatta 672
Query: 624 cggcttttacaaagaaaagtagaagttgaaattgatccctacatggcaagagtaccttca 683
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 671 cggcttttgcaaagaaaagtagaagttgaaattgacccctacatggcaagagtaccttca 612
Query: 684 actctttcagtgacggaagtcaaaattaaagcaaatgttccaaaaaagaggaaaaaaccc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 actctttcagtgacggaagtcaaaattaaagcaaatgttccaaaaaagaggaaaaaaccc 552
Query: 744 aaagcaagtggcggtggcggtggtagtagcggtagtagcggaggtggaggtggtggtaga 803
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaaggaagtggcggtggcggtggtagtagcggtagtagcggaggtggaggtggtggtaga 492
Query: 804 aagggaaagggtggggttggtgaaagtgctaaaggaattggtgggggaaggctgagagaa 863
|||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 491 aagggaaagggtggggttggtgaaagtgttaaaggaattggtgggggacggttgagagaa 432
Query: 864 caaacgagagacagaaatgaacttgcaggtgaagacattgcagaaaaatcagaaactgac 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 caaacgagagacagaaatgaacttgcaggtgaagacattgcagaaaaatcagaaactgac 372
Query: 924 aagtcatctgaaataacttcgacggataaaacaacttcaaagtcaactacagacaaaact 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagtcatctgaaataacttcgacggataaaacaacttcaaagtcaactacagacaaaact 312
Query: 984 acttcatcctcaatatttaaaacatcgacatcactctcctctaaaactgaaaaatcgagt 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acttcatcctcaatatttaaaacatcgacatcactctcctctaaaactgaaaaatcgagt 252
Query: 1044 atagacaaatcttctgaaatgaaatcaaccattaaggattctacagaagcgactacagag 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atagacaaatcttctgaaatgaaatcaaccattaaggattctacagaagcgactacagag 192
Query: 1104 tcacttaagaaaaag 1118
|||||||||||||||
Sbjct: 191 tcacttaagaaaaag 177
Score = 159 bits (80), Expect = 4e-38
Identities = 80/80 (100%)
Strand = Plus / Minus
Query: 1117 agttctcctctcaagattatcatcagctgttggagattattgagcagcagagagagcagg 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 agttctcctctcaagattatcatcagctgttggagattattgagcagcagagagagcagg 57
Query: 1177 aacttcgagttgtcaatcag 1196
||||||||||||||||||||
Sbjct: 56 aacttcgagttgtcaatcag 37
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 497,319
Number of extensions: 11223
Number of successful extensions: 11223
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11223
Number of HSP's successfully gapped: 2
Length of query: 3748
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3730
Effective length of database: 8,109,745
Effective search space: 30249348850
Effective search space used: 30249348850
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)