BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13543 (UTR included)
(2048 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1E06 1078 0.0
>BF01011B1E06
Length = 594
Score = 1078 bits (544), Expect = 0.0
Identities = 584/596 (97%), Gaps = 3/596 (0%)
Strand = Plus / Plus
Query: 342 catctcatacttcgaactcaacttggagacctggagacagttgtggagagtgctggagat 401
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1 catctcatacttcgaactcaacttggagaccnnnagacagttgtggagagtgctggaaat 60
Query: 402 gtgtgatatactgttactgatcgtggatgttagatatgctggcgcgatgttcccgccgtc 461
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gtgtgatatattgttactgatcgtggatgttagatatgctggcgcgatgttccc--cgtc 118
Query: 462 cctctacgagtatataaggagagtggataaggatatgatattggttcttaataaaatcga 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cctctacgagtatataaggagagtggataaggatatgatattggttcttaataaaatcga 178
Query: 522 tctagtccctgcgccagcggtggccgcgtggaaaaagtatctcacagagagatacccggg 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tctagtccctgcgccagcggtggccgcgtggaaaaagtatctcacagagagatacccggg 238
Query: 582 tttgaaagtcgtgtattttacgtcatgccccggttataacttggttggttccggtacgga 641
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttgaaagtcgtgtattttacatcatgccccggttataacttggttggttccggtacgga 298
Query: 642 taaagcgggtctccaagtgcgaagacggaaaggccgtctgcgtatgtgcgctgagggtgc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 taaagcgggtctccaagtgcgaagacggaaaggccgtctgcgtatgtgcgctgagggtgc 358
Query: 702 gacgaaactattggaagcttgcaaagaaatcgtcgagggtaaagtggatttgagcgcgtg 761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aacgaaactattggaagcttgcaaagaaatcgtcgagggtaaagtggatttgagcgcgtg 418
Query: 762 ggagaagaagatccaggacgagggtgacctggacttcgatgaagctgaagtaggagaaac 821
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 419 ggagaagaagatccaggacgagggtgacctggacttcgatgaagctgaagtgggagaaac 478
Query: 822 tatcgtcgaaaagccggatacgacgtattataatcatgagaaatataaaaatggcg-tcc 880
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 479 tatcgtcgaaaagccggatacgacgtattataatcatgagaaatataaaaatggcgttcc 538
Query: 881 taacggtggggtgtgtgggtacccctaatgtgggtaaatcatcgctcatgaatgcc 936
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 539 taacggtggggtgtgtgggtacccctaatgtgggtaaatcgtcgctcatgaatgcc 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 168,635
Number of extensions: 2633
Number of successful extensions: 2633
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2631
Number of HSP's successfully gapped: 1
Length of query: 2048
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2031
Effective length of database: 8,119,229
Effective search space: 16490154099
Effective search space used: 16490154099
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)