BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22137 (UTR included)
(1555 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_484_C1 1927 0.0
>BF14_484_C1
Length = 1033
Score = 1927 bits (972), Expect = 0.0
Identities = 972/972 (100%)
Strand = Plus / Plus
Query: 491 agacttgaaaatgtccatctctgaattcaggaggaagaagcttctttacgtcttcaatgt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agacttgaaaatgtccatctctgaattcaggaggaagaagcttctttacgtcttcaatgt 121
Query: 551 tttcttcgatgtcaatcagagcggtaccattgaaaggaaggatttcgagttggccattga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttcttcgatgtcaatcagagcggtaccattgaaaggaaggatttcgagttggccattga 181
Query: 611 gaaaatctgcagtctccgcggctggaaacctggagacccaaagaacactgaaactcacga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaaaatctgcagtctccgcggctggaaacctggagacccaaagaacactgaaactcacga 241
Query: 671 gattatgatcaagatctgggaagggctcaggaagagagctgattctaacaaggatggcca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gattatgatcaagatctgggaagggctcaggaagagagctgattctaacaaggatggcca 301
Query: 731 ggtgtcagtagaggaatgggtttctatgtggaacgattatgctcagaacccgtccgcagc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtgtcagtagaggaatgggtttctatgtggaacgattatgctcagaacccgtccgcagc 361
Query: 791 attgcaatggcagcaattatatgctcagttcatgtttcaactggaggacgccagtgctga 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attgcaatggcagcaattatatgctcagttcatgtttcaactggaggacgccagtgctga 421
Query: 851 tggtaccatagattgtgatgaattcaccaccgtttgctcttcttatggtattaaccccca 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggtaccatagattgtgatgaattcaccaccgtttgctcttcttatggtattaaccccca 481
Query: 911 ggagtgtaaggtggcttttggcaagatggccaagggcaaggcgagtgtctcttgggagga 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggagtgtaaggtggcttttggcaagatggccaagggcaaggcgagtgtctcttgggagga 541
Query: 971 gttccaggatttgtggaaggaatatttctctacggaagatcctaacgcgtcaggaaattt 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gttccaggatttgtggaaggaatatttctctacggaagatcctaacgcgtcaggaaattt 601
Query: 1031 tatattcggcagaactagtttctaaatttgatgttgacatttaggcccgcaacttcgatc 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tatattcggcagaactagtttctaaatttgatgttgacatttaggcccgcaacttcgatc 661
Query: 1091 tagacaaaaccgtctatacattccctttagtcatgacggacagttttggcttcggggtct 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tagacaaaaccgtctatacattccctttagtcatgacggacagttttggcttcggggtct 721
Query: 1151 atcacacgcgtgtgaaattcaatcacattgtttttataaaacttgtgattgacaaaatat 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atcacacgcgtgtgaaattcaatcacattgtttttataaaacttgtgattgacaaaatat 781
Query: 1211 atgtcaatgtcattttgtgtacgtgttcagagaatataaacataattttctcggtaatat 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atgtcaatgtcattttgtgtacgtgttcagagaatataaacataattttctcggtaatat 841
Query: 1271 aataattgtttgtcttctagtttcagctcaaattagattccttcgtagattacgtgctgt 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aataattgtttgtcttctagtttcagctcaaattagattccttcgtagattacgtgctgt 901
Query: 1331 acaacgaatatttcactattgacttcattcatatctgtagttatatttagacattaaatt 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 acaacgaatatttcactattgacttcattcatatctgtagttatatttagacattaaatt 961
Query: 1391 ctttaaactatatagatgctattgcttctcttattaaagaagattttatctcattagata 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ctttaaactatatagatgctattgcttctcttattaaagaagattttatctcattagata 1021
Query: 1451 tatgttttaaat 1462
||||||||||||
Sbjct: 1022 tatgttttaaat 1033
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,207
Number of extensions: 8596
Number of successful extensions: 8596
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8596
Number of HSP's successfully gapped: 1
Length of query: 1555
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1538
Effective length of database: 8,119,229
Effective search space: 12487374202
Effective search space used: 12487374202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)