BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01338 (UTR included)
(3004 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2F09 1509 0.0
>BF01020A2F09
Length = 792
Score = 1509 bits (761), Expect = 0.0
Identities = 785/792 (99%), Gaps = 1/792 (0%)
Strand = Plus / Plus
Query: 322 tcaacaaaaatactaaaagtctattatattatattaa-ttgaatcagtataataaacggg 380
|||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tcaacaaatatactaaaagtctattatattatattannttgaatcagtataataaacggg 60
Query: 381 attattttgcacggtttaaaagtttttcaagaacctgtggcattggcctgaataatggca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attattttgcacggtttaaaagtttttcaagaacctgtggcattggcctgaataatggca 120
Query: 441 gaatctcaaaaagatagcgaaaatcctcttaacatagatggaaataatttcaactcggaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatctcaaaaagatagcgaaaatcctcttaacatagatggaaataatttcaactcggaa 180
Query: 501 atgtatatagaatgtctattgaaatgtgctactcttcgacaagtcatggataaagaagct 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtatatagaatgtctattgaaatgtgctactcttcgacaagtcatggataaagaagct 240
Query: 561 gaggttgtaacacagagtcagtacttgcaatctgaaatgcagactttggtgtacgaaaat 620
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggttgtaacacagagtcagtacctgcaatctgaaatgcagactttggtgtacgaaaat 300
Query: 621 tataataaatttatatcagctacagaaacagttcgaaaaatgcgttcggacttccagata 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tataataaatttatatcagctacagaaacagttcgaaaaatgcgttcggacttccagata 360
Query: 681 atgcaagaagaaatgaataaattaagtgaaaatattaataagattactacatttagttca 740
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 361 atgcaagaagaaatgaataaattaagtgaaaatattaataagattacaacatttagttca 420
Query: 741 actatatctgaaaatttgaaggagagcggaactactgtcaatagactttgcaatacaagg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actatatctgaaaatttgaaggagagcggaactactgtcaatagactttgcaatacaagg 480
Query: 801 caattacttgataaattgcaatttgtgttcctattgccaactcaactgaataaagccatt 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caattacttgataaattgcaatttgtgttcctattgccaactcaactgaataaagccatt 540
Query: 861 gaagaaaatcgatacatggatgcggttaatgactacacacatgctcaaagagtgttacag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 gaagaaaatcgatacatggatgcggttaatgactacacacatgctcaaagagtattacag 600
Query: 921 aaatatggcagtcagccatcctttcagagcatacaaactgaatgctccgagattataaat 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatatggcagtcagccatcctttcagagcatacaaactgaatgctccgagattataaat 660
Query: 981 gatctgaaaaagacattaagagaaagattgctgacacccgacacaactgcatcggaatta 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatctgaaaaagacattaagagaaagattgctgacacccgacacaactgcatcggaatta 720
Query: 1041 gctgaaagtgttggactattgcgacagttacaagaaagtgattcatctttacaggatata 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctgaaagtgttggactattgcgacagttacaagaaagtgattcatctttacaggatata 780
Query: 1101 tttctaacctgc 1112
||| ||||||||
Sbjct: 781 tttttaacctgc 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 370,127
Number of extensions: 7364
Number of successful extensions: 7364
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7363
Number of HSP's successfully gapped: 1
Length of query: 3004
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2986
Effective length of database: 8,109,745
Effective search space: 24215698570
Effective search space used: 24215698570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)