BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00910 (UTR included)
(2617 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B1F01 1162 0.0
BF01058A2B09 815 0.0
>BF01032B1F01
Length = 693
Score = 1162 bits (586), Expect = 0.0
Identities = 670/694 (96%), Gaps = 3/694 (0%)
Strand = Plus / Minus
Query: 1849 tgagacgcgccattgtacctcatttcaatatggctgtcctttccccgccgttccaatgga 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tgagacgcgccattgtacctcatttcaatatggctgtcctttccccgccgttccaatgga 634
Query: 1909 aagacgccgtcatcgccgcactctggatagggcttgcgttgtccggtttcctggttcaac 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aagacgccgtcatcgccgcactctggatagggcttgcgttgtccggtttcctggttcaac 574
Query: 1969 actatcataatcgggccaggcctcccttcccgccgccaccgcggagcgtgagaccggtct 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 actatcataatcgggccaggcctcccttcccgccgccaccgcggagcgtgagaccggtct 514
Query: 2029 acgagccgagaagacgttacggacagatatctgcgccgatgatgccggtcttcgcggcgc 2088
|||||||||||||||||||||||||||| | | ||||||||||||||||||| |||||
Sbjct: 513 acgagccgagaagacgttacggacagattacatcaccgatgatgccggtcttcgtggcgc 454
Query: 2089 cgtcggaaaggacgcctctgttggcctaaatattgtaacccactaacacgataacttaag 2148
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 453 cgtcggaaaggacgcctctgttggcctaaatattgtcacccactaacacgataacttaag 394
Query: 2149 aactagtaaaaaaatgtatggaaaaaatcttcccaaaaaatatctgctcgcaaaacat-c 2207
||||||||| |||||||||| ||||| || |||||||||||||||||| ||||||||
Sbjct: 393 aactagtaaggaaatgtatgggaaaaacctacccaaaaaatatctgctcccaaaacataa 334
Query: 2208 taaaaaaaaatttacttgccaattgttaacttactgaagtacttaccgatcatattaagt 2267
|||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 333 aaaaaaaaaatttacttgccaattgttaacttactcaagtacttaccgattata-taagt 275
Query: 2268 cataatcacatatcacgttagggataagtaaaaaatatataaatatttataaaaaatata 2327
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 274 cataatcacatatcacgttaggaataagtaaaaaatatataaatatttataaaaaatata 215
Query: 2328 taatcgtaatttgtatgaaacgtgcttcacggttatcgtacctcatgtgagacttaccaa 2387
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 214 taatcgtaatttgtatgaaacctgcttcacggttatcgtacctcatgtgagacttaccaa 155
Query: 2388 acgaacgctttgtagt-caaataatttgcaacaagaccttataaggtactttacaatcgt 2446
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acgaacgctttgtagtaaaaataatttgcaacaagaccttataaggtactttacaatcgt 95
Query: 2447 caaataaaaatacattgcttgctagtttagggatgtgatttaaaatcttaaatcgtcagc 2506
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 94 caaataaaaatacattgcttgctagtttagggatgtgatttaaaatcttaagtcgtcagc 35
Query: 2507 tctcagtggtaaccgagacgtttaagactgcttg 2540
||||||||||||||||||||||||||||||||||
Sbjct: 34 tctcagtggtaaccgagacgtttaagactgcttg 1
>BF01058A2B09
Length = 440
Score = 815 bits (411), Expect = 0.0
Identities = 417/419 (99%)
Strand = Plus / Plus
Query: 1313 cggttgtgagatcatggacgacttcttttcccaaatgttatgtgcatcgctgacgttcgt 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggttgtgagatcatggacgacttcttttcccaaatgttatgtgcatcgctgacgttcgt 60
Query: 1373 tggtcttttcgtgtgttttttcggacacaggttttttaaaactgaaatgtttctggtcgg 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtcttttcgtgtgttttttcggacacaggttttttaaaactgaaatgtttctggtcgg 120
Query: 1433 tttcgtcaccggagttgtaattacatacattctgatatctttaatggctgatttgaatag 1492
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcgtcaccggagttgtcattacatacattctgatatctttaatggctgatttgaatag 180
Query: 1493 ggcagcacttttgggcgcgtcagtattatccggggtgtgtttcggttcgatctggttgct 1552
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 ggcagcacttttgggcgcgtcagtattatccggggtgtgtttcggctcgatctggttgct 240
Query: 1553 tttctggtggttctacggcataccaatatttgccgtgtttctgtcaacattgaacgtagg 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttctggtggttctacggcataccaatatttgccgtgtttctgtcaacattgaacgtagg 300
Query: 1613 cttcctattcgctgctataatatatcacggcttgccaggcggtttaacagaattggaatt 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcctattcgctgctataatatatcacggcttgccaggcggtttaacagaattggaatt 360
Query: 1673 ggacttgaacttttggacactttttatttttataatgctactgacagctctgttgttgc 1731
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggacttgaacttttggacactttttatttttataatgctactgacagctctgttgttgc 419
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 327,992
Number of extensions: 7293
Number of successful extensions: 7293
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7287
Number of HSP's successfully gapped: 2
Length of query: 2617
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2600
Effective length of database: 8,119,229
Effective search space: 21109995400
Effective search space used: 21109995400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)