BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09859 (UTR included)
(1951 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2A12 1542 0.0
BF01026A2B01 373 e-103
>BF01057B2A12
Length = 827
Score = 1542 bits (778), Expect = 0.0
Identities = 815/827 (98%), Gaps = 4/827 (0%)
Strand = Plus / Plus
Query: 414 ctcaaacatctgacaaaatcactaatttgtgttagtgtttt----cttttccaatatagt 469
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ctcaaacatctgacaaaatcactaatttgtgttagtgttttatatcttttccaatatagt 60
Query: 470 gttttaaaattgtgaactaataaaaaaaaccatgggttgtgatggaggtaccattccacg 529
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gttttaaaattgtgaactaataaaaaaaaacatgggttgtgatggaggtaccattccacg 120
Query: 530 ccgcgacgaactcgtacgattgaaaaagaaaccagaacagaaagataaggatgctgaacg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgcgacgaactcgtacgattgaaaaagaaaccagaacagaaagataaggatgctgaacg 180
Query: 590 ctcctttaaatggcgtaattgcgctctttcgcaacaacccttgcaagaaccgatagttgc 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcctttaaatggcgtaattgcgctctttcgcaacaacccttgcaagaaccgatagttgc 240
Query: 650 ctgtggcttaggtcgactttacagtaaaagctctgtattggaggctttactggacaagga 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtggcttaggtcgactttacagtaaaagctctgtattggaggctttactggacaagga 300
Query: 710 atctaaaccagaaattatcaatcatatcaaaaacctgaaggatgtctgcaatctgaaact 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctaaaccagaaattatcaatcatatcaaaaacctgaaggatgtctgcaatctgaaact 360
Query: 770 tatcaacaaccctgcatataagaagacagagcacaccgagggcgctgtcggagacagttc 829
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 361 tatcaacaaccctgcatataagaagacagagcacaccgagggtgctgtcggagatagttc 420
Query: 830 accatacatctgccccatcagtgggttggaaatgagtggcaagttcagattcgtgttcct 889
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 accatacatctgccccatcagtggtttggaaatgagtggcaagttcagattcgtgttcct 480
Query: 890 ttggaactgtggctgtgtgctggcggagagagctctgaaggaggtcaaacagaacttgtg 949
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 481 ttggaactgtggctgtgtgctggcggagagggctctgaaggaggtcaaacagaacttgtg 540
Query: 950 tcatatgtgccaacaaccattcacagacaacgatgtggttgtgctcaatggatctgatga 1009
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcatatgtgtcaacaaccattcacagacaacgatgtggttgtgctcaatggatctgatga 600
Query: 1010 agacgtggaacagttaaaagaaaagatggcagttcgagtttctaatagaaaaacaaagaa 1069
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 agacgttgaacagttaaaagaaaagatggcagtgcgagtttctaatagaaaaacaaagaa 660
Query: 1070 gcctaaagcagaaaaagtaggacaggaagtgaaaattgaacctccttcaccggctatatc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcctaaagcagaaaaagtaggacaggaagtgaaaattgaacctccttcaccggctatatc 720
Query: 1130 atcagacacaccgtcgacctcaacctcaaaggaggtgacgtctaatgatgatgctaaggt 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atcagacacaccgtcgacctcaacctcaaaggaggtgacgtctaatgatgatgctaaggt 780
Query: 1190 taaaaaggaattagacacgattccattagcattgccaaaatttaacc 1236
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taaaaaggaattagacacgattccattagcattgccaaaatttaacc 827
>BF01026A2B01
Length = 750
Score = 373 bits (188), Expect = e-103
Identities = 203/208 (97%)
Strand = Plus / Minus
Query: 1646 aatttctaatgatggtcatcaaaatatatttaaatatagaacgatttcatgaacacgtac 1705
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aatttctaatgatggtcaccaaaatatatttaaatatagaacgatttcatgaacacgtac 691
Query: 1706 aattactataaaatataccataaataaaatgtccagttagaaccccttgaaatacgagtt 1765
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gattactataaaatataccataaataaaatgtccagttagaaccccttgaaatacgagtt 631
Query: 1766 gagtataattttagtatgtctaatctaaaccatagtcctaacttcgaagaggtctagtga 1825
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 630 gagtataattttagtatgtctaatctaaaccatagtcctaactttgaagaggtctagtga 571
Query: 1826 aagtaaaatgtcagctctaggaagacgt 1853
||||||||||||| ||||||||| ||||
Sbjct: 570 aagtaaaatgtcatctctaggaacacgt 543
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 1908 taaaatttgcttaatcttataagtttaaaagaaatgcacaagat 1951
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 538 taaaatttgcttaatcttataagtttagaagaaatgcacaagat 495
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,507
Number of extensions: 6644
Number of successful extensions: 6644
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6643
Number of HSP's successfully gapped: 3
Length of query: 1951
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1934
Effective length of database: 8,119,229
Effective search space: 15702588886
Effective search space used: 15702588886
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)