BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10523 (UTR included)
(2902 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2H03 80 2e-14
BF01012A1B09 78 9e-14
BF14_729_C3 78 9e-14
BF01044B2E12 74 1e-12
BF01021B1F09 72 5e-12
BF01052B1F12 68 9e-11
>BF01049B2H03
Length = 832
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/59 (93%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 152 taataaaatacgcgtagtataatccgaaaaatattagtttcatttaaatgattactcgc 210
||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 278 taataaaatacgcttagta--atccgaaaaatattagtttcatttaaatgaatactcgc 334
>BF01012A1B09
Length = 841
Score = 77.8 bits (39), Expect = 9e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 144 ttttaaaataataaaatacgcgtagtataatccgaaaaatattagtttcatttaaatga 202
||||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||
Sbjct: 791 ttttaaaataataaaatccgcgtagtgta-tccgaaatatattagtttcatttaaatga 734
>BF14_729_C3
Length = 2041
Score = 77.8 bits (39), Expect = 9e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 144 ttttaaaataataaaatacgcgtagtataatccgaaaaatattagtttcatttaaatgat 203
|||| |||||||||||| ||||||||||| |||||| |||| ||| |||||||||||||
Sbjct: 1646 tttttaaataataaaatccgcgtagtata-tccgaataatactagcttcatttaaatgaa 1704
Query: 204 tactcgcgaaa 214
|||||||||||
Sbjct: 1705 tactcgcgaaa 1715
>BF01044B2E12
Length = 823
Score = 73.8 bits (37), Expect = 1e-12
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 149 aaataataaaatacgcgtagtataatccgaaaaatattagtttcatttaaatg 201
|||||||||||| ||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 34 aaataataaaatccgcgtagta-aatccgaaaaatactagtttcatttaaatg 85
>BF01021B1F09
Length = 792
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 142 gtttttaaaataataaaatacgcgtagtataatccgaaaaatattagt 189
|||||||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 656 gtttttaaaataataaaatacgcgtagtgtaatgcgaaaaatcttagt 609
>BF01052B1F12
Length = 785
Score = 67.9 bits (34), Expect = 9e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 153 aataaaatacgcgtagtataatccgaaaaatattagtttcatttaaatga 202
||||||| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 374 aataaaagacgcgaagtata-tccgaaaaatattagtttcatttaaatga 326
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,185
Number of extensions: 4851
Number of successful extensions: 4851
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4847
Number of HSP's successfully gapped: 6
Length of query: 2902
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2884
Effective length of database: 8,109,745
Effective search space: 23388504580
Effective search space used: 23388504580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)