BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18453 (UTR included)
(3025 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A1G09 1409 0.0
>BF01021A1G09
Length = 737
Score = 1409 bits (711), Expect = 0.0
Identities = 723/727 (99%)
Strand = Plus / Plus
Query: 1836 ttccttgagaagacatactgggctacgtatggactgccattctttgttgacatagcaaac 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttccttgagaagacatactgggctacgtatggactgccattctttgttgacatagcaaac 70
Query: 1896 gtaacgcacacgacgaaaatggaagagctgttcggaacgatgttctcagagacatcatca 1955
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtaacgcacacaacgaaaatggaagagctgttcggaacgatgttctcagagacatcatca 130
Query: 1956 ccaagagcaataattttccaaaacggttataaaaatgcgacaactttagagagcgttata 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagagcaataattttccaaaacggttataaaaatgcgacaactttagagagcgttata 190
Query: 2016 aaattaatgagaactaataacaaaactgcgtataacgaaactagaaacaaaataaactgt 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaattaatgagaactaataacaaaactgcgtataacgaaactagaaacaaaataaactgt 250
Query: 2076 aacgacgacaacagctgtattcttaaagaaagtgaacattggaacatccttggtctaaga 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aacgacgacaacagctgtattcttaaagaaagtgaacattggaacatccttggtctaaga 310
Query: 2136 ggagacttatttcaaaaacataaagaagcttacggaattattgatactaaagtagttagc 2195
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 311 ggagacttgtttcaaaaacataaagaagcttacggaattattgatactaaagtagtgagc 370
Query: 2196 gctgattcaaaggactctctggatttcgttgcaatatcaagtccacagttcactgagact 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctgattcaaaggactctctggatttcgttgcaatatcaagtccacagttcactgagact 430
Query: 2256 aaaacagaaaacgcgtccaaaataaataaagggaatatagcgtccacgtatacggatcaa 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaaacagaaaacgcgtccaaaataaataaagggaatatagcgtccacgtatacggatcaa 490
Query: 2316 ttcgatgacgtgccaataataaatggtttagaaatacgggatcttataaaacaacagcag 2375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttcgatgacgtgccaataataaatggtttagaaatacgggatcttataaaacaacagcag 550
Query: 2376 gaggaagcggaaagagaaacactggagctactcaacaaagacaccgttaaaccattccag 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 551 gaggaagcggaaagagaaacactggagctactcaacaaagacaccgttaaacctttccag 610
Query: 2436 tggtcgaaaagcgagttcaaagatgacgctcacgaaggtctcccggacatgtggaacttt 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggtcgaaaagcgagttcaaagatgacgctcacgaaggtctcccggacatgtggaacttt 670
Query: 2496 ggtatctacagaccgaattggtcctggtgaatctctagcttttttttttaatggtcgtca 2555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ggtatctacagaccgaattggtcctggtgaatctctagcttttttttttaatggtcgtca 730
Query: 2556 atttgtt 2562
|||||||
Sbjct: 731 atttgtt 737
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 403,559
Number of extensions: 10036
Number of successful extensions: 10036
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10036
Number of HSP's successfully gapped: 1
Length of query: 3025
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3007
Effective length of database: 8,109,745
Effective search space: 24386003215
Effective search space used: 24386003215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)