BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN07852 (UTR included)
         (1399 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01058B2C06                                                           82   3e-15
BF14_729_C3                                                            68   4e-11

>BF01058B2C06
          Length = 772

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                       
Query: 272 aactacatatttccgacgtttcgtttactttggtgcaaccttgatcacggccagacgaga 331
           ||||||||||| ||||||||||| |||||||| |||| || |||||||||||||||||||
Sbjct: 423 aactacatattcccgacgtttcggttactttgctgcagccgtgatcacggccagacgaga 482

            
Query: 332 t 332
           |
Sbjct: 483 t 483


>BF14_729_C3
          Length = 2041

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 272  aactacatatttccgacgtttcgtttactttggtgcaaccttgatcacggccagacgaga 331
            ||||||||| | ||||||||||| ||||||||  |||||| ||||||||| |||||||| 
Sbjct: 1647 aactacataatcccgacgtttcggttactttgcagcaaccgtgatcacgggcagacgagg 1588

                  
Query: 332  tgtgaa 337
            ||||||
Sbjct: 1587 tgtgaa 1582


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,812
Number of extensions: 4668
Number of successful extensions: 4668
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4668
Number of HSP's successfully gapped: 2
Length of query: 1399
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1382
Effective length of database: 8,119,229
Effective search space: 11220774478
Effective search space used: 11220774478
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)