BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17724 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1960_C1 1292 0.0
>BF14_1960_C1
Length = 777
Score = 1292 bits (652), Expect = 0.0
Identities = 679/688 (98%)
Strand = Plus / Plus
Query: 496 gaataatggcgtaccgtttgtcgggctggttccgcagctcgctaaagaagcgtcccgtgc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gaataatggcgtaccgtttgtcgggctggttccgcagctcgctaaagaagcgtcccgtgc 149
Query: 556 tcactaacaccgccgtgtacgccgctttctacaccgctgcggagttgtcgcagcaaacgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcactaacaccgccgtgtacgccgctttctacaccgctgcggagttgtcgcagcaaacgt 209
Query: 616 ttaataaaatatattcgacagataagccagaaatcgacttcgcagcggcgggtcgtatag 675
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttaataaaatatattcgtcagataagccagaaatcgacttcgcagcggcgggtcgtatag 269
Query: 676 tgacggttgggagttgtctctacgctcctactctataccattggtacaagttcctggata 735
||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 270 tgacggttgggagctgtctctacgcccctacactgtaccattggtacaagttcctggata 329
Query: 736 gaaaattcgttggcactactttaaaagtggtcaacaccaaagttctgtgcgaccagctca 795
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 330 gaaaattcgttggcactactttaaaagtggtcaccaccaaagttctgtgcgaccagctca 389
Query: 796 ttatgacaccgattctcctggcaatattttacacggggatgggtatcgtcgaaaggaggg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttatgacaccgattctcctggcaatattttacacggggatgggtatcgtcgaaaggaggg 449
Query: 856 aagacgttttctcagaactcaaagccaagtactggcgtacgtttatcgctaaccaggctt 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aagacgttttctcagaactcaaagccaagtactggcgtacgtttatcgctaaccaggctt 509
Query: 916 actggataccagcgcagacggtcaactttttattgatgccaccaaacctacgagttgttt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 actggataccagcgcagacggtcaactttttattgatgccaccaaacctacgagttgttt 569
Query: 976 acgtcgcttccgcctcattcatatggatcaacgtgctctgttttattaaacgacaaacga 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acgtcgcttccgcctcattcatatggatcaacgtgctctgttttattaaacgacaaacga 629
Query: 1036 ctgacaagaaataaaatgaggaacaatctgcatgatccctaatattaattgaaatactat 1095
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctgacaagaaataaaatgagaaacaatctgcatgatccctaatattaattgaaatactac 689
Query: 1096 atctcctttgtctatacttacagcaggagttattatatatgtaattacacgtaaaatttc 1155
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 690 atctcctttgtctatacttacagcatgagttattatatatgtaattacacgtaaaatttc 749
Query: 1156 ctatacataactccatacatactttcta 1183
||||||||||||||||||||||||||||
Sbjct: 750 ctatacataactccatacatactttcta 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,594
Number of extensions: 6113
Number of successful extensions: 6113
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6113
Number of HSP's successfully gapped: 1
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)