BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01647 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1215_C1 1332 0.0
>BF14_1215_C1
Length = 859
Score = 1332 bits (672), Expect = 0.0
Identities = 698/706 (98%), Gaps = 3/706 (0%)
Strand = Plus / Plus
Query: 492 gattgcatcatgctgtctcgaatgtgcgtggctcggtctgccttaaacatcacgcagacc 551
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gattgcatcatgctatctcgaatgtgcgtggctcggtctgccttaaacatcacgcagacc 216
Query: 552 cttaaaactcctgtaccccaaagatttgttcccaaaaattacgtaataagaaattatgct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cttaaaactcctgtaccccaaagatttgttcccaaaaattacgtaataagaaattatgct 276
Query: 612 cgggaaccgcgttctcgtatggcaacaagatcccagccaacagtatgggagaaactaatg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cgggaaccgcgttctcgtatggcaacaagatcccagccaacagtatgggagaaactaatg 336
Query: 672 gccccagccggaccaaacgctttcagtttggggaaaggagcattagctggggcatcagct 731
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gccccagcaggaccaaacgctttcagtttggggaaaggagcattagctggggcatcagcc 396
Query: 732 gttggcatgatagcattatgctactatggctcaggcgttaaacctggcacgctacaagag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gttggcatgatagcattatgctactatggctcaggcgttaaacctggcacgctacaagag 456
Query: 792 gcacatctttggcctcagtatgtcaaggatcgcatcaaggccacatatggatacattgcc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcacatctttggcctcagtatgtcaaggatcgcatcaaggccacatatggatacattgcc 516
Query: 852 ggttcattgctactaactgctggcagtgctatcatagtgtttagaacacccgccctgctt 911
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 517 ggttcattgctactaactgctggcagtgctatcacagtgtttagaacacccgccctgctt 576
Query: 912 aatatggtagcgagaagtggatgggtttctatcatcatgacaatgggtttgatgattggt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aatatggtagcgagaagtggatgggtttctatcatcatgacaatgggtttgatgattggt 636
Query: 972 tctgggatggtggtacgaggaatggaatataagccaggttttggagctaagcaaatggct 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tctgggatggtggtacgaggaatggaatataagccaggttttggagctaagcaaatggct 696
Query: 1032 tggatggtacacactggcatcatgggagcatgtattgctcctatatgtttcctcggcggt 1091
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 697 tggatggtacacactggcatcatgggagcatgtattgcgcctatatgtttcct---cggt 753
Query: 1092 cctattctgatgcgcgctgcttggtacacagctggtgtggtcggtgggttgagtactttg 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cctattctgatgcgcgctgcttggtacacagctggtgtggtcggtgggttgagtactttg 813
Query: 1152 gcggtgtgcgcaccatcaggggagtttcttaacatgagagctccac 1197
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gcggtgtgcgcaccatcaggggagtttcttaacatgagagctccac 859
Score = 234 bits (118), Expect = 4e-61
Identities = 148/157 (94%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 199 caaagacattctagaaaacgaaccgaactgcagaaaaatatttataatatccaggaattg 258
||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 caaagaccttntagaaaccgaaccgaactgaagaaaaatatttataatatccaggaattg 60
Query: 259 ttttgctcttgcttatcaaaatagtcattgc-tttaaaaaaaagttctgtttcctgccag 317
||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 61 ttttgctcttgcttatcaaaatattaattgcttttaaaaaaaagttctgtttcctgccag 120
Query: 318 gtgtgaattttagtttgaaaaaagtcgcaaaacactg 354
|||||||| ||||||||| ||||||||||||||||||
Sbjct: 121 gtgtgaatattagtttgataaaagtcgcaaaacactg 157
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,677
Number of extensions: 5839
Number of successful extensions: 5839
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5837
Number of HSP's successfully gapped: 2
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)