BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10827 (UTR included)
(1741 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2732_C1 1542 0.0
>BF14_2732_C1
Length = 798
Score = 1542 bits (778), Expect = 0.0
Identities = 793/798 (99%)
Strand = Plus / Minus
Query: 412 tagtgttacgaatattttcgaccaacttatttattttgttcagatttttcataaagaaag 471
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 798 tagtgttacgaatattttcgacgaacttatttattttgttcagatttttcataaagaaag 739
Query: 472 ttattcagaagaagtaaacgctttctaaaatggctggcataccgttgatgtatgctcaag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttattcagaagaagtaaacgctttctaaaatggctggcataccgttgatgtatgctcaag 679
Query: 532 aagattgtgagctaggaggaaaggacaatattgaggatgactttgcttatcgcaacaatg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aagattgtgagctaggaggaaaggacaatattgaggatgactttgcttatcgcaacaatg 619
Query: 592 ttttaaatgcggacaaggaaatcaggcttggctttattcgcaaggtgtatggactgctga 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttaaatgcggacaaggaaatcaggcttggctttattcgcaaggtgtatggactgctga 559
Query: 652 ctgtacaactcttagctacagtcgccatagccggagtattcctcctcgttaaacctgtgc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgtacaactcttagctacagtcgccatagccggagtattcctcctcgttaaacctgtgc 499
Query: 712 agttgtttattcatcaaaatgactggatggtacttgtttcatttatcatgagcatgggga 771
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agctgtttattcatcaaaatgactggatggtacttgtttcatttatcatgagcatgggga 439
Query: 772 ttttgttagccctcatcgtcaagaggagagactatcctgcaaatttgtatttactggctg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttttgttagccctcatcgtcaagaggagagactatcctgcaaatttgtatttactggctg 379
Query: 832 catttactgtcgtacaagcgtatactattggtgtagttgtatcctattgcgacactctag 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 catttactgtcgtacaagcgtatactattggtgtagttgtatcctattgcgacactctag 319
Query: 892 tggtgctccaggctctagcgataacatttactgtggtattttctctgaccctcttcactc 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tggtgctccaggctctagcgataacatttactgtggtattttctctgaccctcttcactc 259
Query: 952 tcaacacaaaacgtgatttctcctttgttggctatggcctcgttgctgccctctgtgtgc 1011
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 258 tcaacacaaaacgtgatttctcctttgttggctatggcctcgttgctgcactctgtgtgc 199
Query: 1012 tcattattggaggtatcatacaaatcttcctgcaaagctccttgtttgagattgcgttgt 1071
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tcattattggaggtatcattcaaatcttcctgcaaagctccttgtttgagattgcgttgt 139
Query: 1072 cgtctgtaggagctatctgcttcagtctgtttctgatcttcgacacgcaacagatgatga 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cgtctgtaggagctatctgcttcagtctgtttctgatcttcgacacgcaacagatgatga 79
Query: 1132 ccgtactgtccccggaagaatacatcctcgccaccataaatctttacatggacatcttga 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ccgtactgtccccggaagaatacatcctcgccaccataaatctttacatggacatcttga 19
Query: 1192 acttgttcctatacatct 1209
|| |||||||||||||||
Sbjct: 18 acctgttcctatacatct 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,286
Number of extensions: 4826
Number of successful extensions: 4826
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4826
Number of HSP's successfully gapped: 1
Length of query: 1741
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1724
Effective length of database: 8,119,229
Effective search space: 13997550796
Effective search space used: 13997550796
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)