BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15879 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A1G04 1437 0.0
BF14_1249_C1 167 8e-41
>BF01013A1G04
Length = 798
Score = 1437 bits (725), Expect = 0.0
Identities = 743/749 (99%)
Strand = Plus / Plus
Query: 466 aggtcctcgatcaaaagacaggaaaccagctaggaatgctgagctacggtatatcagcgc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aggtcctcgatcaaaagacaggaaaccagctaggaatgctgagctacggtatatcagcgc 109
Query: 526 ttttgaaagaaaaaaattttactatgttgaatcaaccgatgaacctacaaaaatctggcc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttttgaaagaaaaaaattttactatgttgaatcaaccgatgaacctacaaaaatctggcc 169
Query: 586 ccgaatctaaaatcattattgcggctcaattgaagatccttaaagaggctgtcaaggaag 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ccgaatctaaaatcattattgcggctcaattgaagatccttaaagaggctgtcaaggaag 229
Query: 646 aggactttgatgaagaaacagtttccgtggcaagcgaaccatcggatgaccgcacggagg 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 230 aggactttgatgaagaaacagtttccgtggcaagcgaaccatcggatgaccgcactgagg 289
Query: 706 acaaaaaaccggatccaccgagcacggaaaccacggctgttgcagcagctgtaccatcga 765
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 290 acaaaaaaccggatccaccgagcacggaaaccacggctgttacagcagctgttccatcga 349
Query: 766 atacagatctgaagaatatggaagacactcccccagctaccgacactatcgacaataact 825
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acacggatctgaagaatatggaagacactcccccagctaccgacactatcgacaataact 409
Query: 826 ccgaaaaatctatccccgtcgaacaaattataaaggaagttgatgtacctcaagagagtc 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ccgaaaaatctatccccgtcgaacaaattataaaggaagttgatgtacctcaagagagtc 469
Query: 886 aagcgccgtctgaacgtgattcaccaaaattaattcacaggacctcttcaataacgacat 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aagcgccgtctgaacgtgattcaccaaaattaattcacaggacctcttcaataacgacat 529
Query: 946 cagctggcgaggctggacttgggaggattctgttatctctacgttacagcatgcagaatc 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cagctggcgaggctggacttgggaggattctgttatctctacgttacagcatgcagaatc 589
Query: 1006 aaacattatatgttgttgtacacaagataatgaatatacctctcaaggaccccaccaatg 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aaacattatatgttgttgtacacaagataatgaatatacctctcaaggaccccaccaatg 649
Query: 1066 tcccggacccatatgttaaactatacctgctacctggtcgatctaaggattccaaacgca 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tcccggacccatatgttaaactatacctgctacctggtcgatctaaggattccaaacgca 709
Query: 1126 aaactgtggttgtgaaagacaattgtatgccggagtatgacgaacagtttgagtggagca 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaactgtggttgtgaaagacaattgtatgccggagtatgacgaacagtttgagtggagca 769
Query: 1186 tcccgctagctgagcttcactccagacag 1214
||||||| |||||||||||||||||||||
Sbjct: 770 tcccgctggctgagcttcactccagacag 798
>BF14_1249_C1
Length = 1107
Score = 167 bits (84), Expect = 8e-41
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 466 aggtcctcgatcaaaagacaggaaaccagctaggaatgctgagctacggtatatcagcgc 525
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 1000 aggtcctcgatcaaaagacagnnnnncagctaggaatgctgnnctacggtatatcagcgc 1059
Query: 526 ttttgaaagaaaaaaattttactatgttgaatcaaccgatgaacctac 573
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 ttttgaangaaaaaaattttactatgttgaatcaaccgatgaacctac 1107
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,015
Number of extensions: 9183
Number of successful extensions: 9183
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9183
Number of HSP's successfully gapped: 2
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)