BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10888 (UTR included)
(3007 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E09 1118 0.0
>BF01025B1E09
Length = 783
Score = 1118 bits (564), Expect = 0.0
Identities = 590/599 (98%), Gaps = 6/599 (1%)
Strand = Plus / Plus
Query: 1923 aaccacgtcaccagttgcccctacttgcccgggactttgggtgaaccctacttga----- 1977
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 aaccacgtcaccagttgcccctacttgcccgggactttgggtgaaccctacttgatttca 98
Query: 1978 -gtgcgatcaagaactcctcagtgagtgatgactcgtcttcggaattgatggagcttgaa 2036
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ggtgcgatcaaaaactcctcagtgagtgatgactcgtcttcggaattgatggagcttgaa 158
Query: 2037 gatgcagctttactcgctgaccctcaacttgagaataacatccgtcgtctgcgcgaagaa 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gatgcagctttactcgctgaccctcaacttgagaataacatccgtcgtctgcgcgaagaa 218
Query: 2097 gagcgtcttctactggaacaacaggccgccatggaggctacaggcaacaccgacgacatt 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gagcgtcttctactggaacaacaggccgccatggaggctacaggcaacaccgacgacatt 278
Query: 2157 gcagctctggaacatcaggatcttctacgtcttaaccaccttaaacagcaagagctgcag 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gcagctctggaacatcaggatcttctacgtcttaaccaccttaaacagcaagagctgcag 338
Query: 2217 aggcagctggttattctcgctcagcgtcaggcacgtgccaatgccaatgccaatgccaat 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aggcagctggttattctcgctcagcgtcaggcacgtgccaatgccaatgccaatgccaat 398
Query: 2277 gccaatgccaacgctagctccagcctgttggcgatcgagggaccgagggatcgttccaca 2336
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gccaacgccaacgctagctccagcctgttggcgatcgagggaccgagggatcgttccaca 458
Query: 2337 gaagacaccgatcgcagcgaacgccagcgtgcctgccgcagcgatctgaatgagcgtagt 2396
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 459 gaagacaccgatcgcagcgaacgccagcgtgcctgccgcagcgatctgaacgagcgtagt 518
Query: 2397 gaccgcctagagcgatctgatcgcggggaacttcgtcgacgtacatgcaacgtgcgtgta 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaccgcctagagcgatctgatcgcggggaacttcgtcgacgtacatgcaacgtgcgtgta 578
Query: 2457 aatgctctccacgtcgcgtcctgtgcggaggcgttggagacggacgtctgaccaatggg 2515
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aatgctctccacgtcgcgtcctgtgcggaggcgttggagacggacgtctgaccaatggg 637
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 332,643
Number of extensions: 7102
Number of successful extensions: 7102
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7095
Number of HSP's successfully gapped: 2
Length of query: 3007
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2989
Effective length of database: 8,109,745
Effective search space: 24240027805
Effective search space used: 24240027805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)