BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00052 (UTR included)
(2359 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A2G05 991 0.0
>BF01061A2G05
Length = 654
Score = 991 bits (500), Expect = 0.0
Identities = 509/512 (99%)
Strand = Plus / Plus
Query: 1766 gccgcagaacctctccaccggcgtagactctaagttgacgccgccgccgcacgccatcga 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gccgcagaacctctccaccggcgtagactctaagttgacgccgccgccgcacgccatcga 193
Query: 1826 cttctacaagttcaaggatcagttcaacgtctaagctgttcctctaccctagctccccct 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttctacaagttcaaggatcagttcaacgtctaagctgttcctctaccctagctccccct 253
Query: 1886 agctccctcagctgccctagctccgttgtatcttatagtagatgatttatattttttatc 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agctccctcagctgccctagctccgttgtatcttatagtagatgatttatattttttatc 313
Query: 1946 tctccaagagattattgacattttattgtcgcgattgattttatttacattgattttctc 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tctccaagagattattgacattttattgtcgcgattgattttatttacattgattttctc 373
Query: 2006 ttttaaacgtattcgttggaacttgtcgggcgatgttgtgctcggcggcggccctcactc 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttttaaacgtattcgttggaacttgtcgggcgatgttgtgctcggcggcggccctcactc 433
Query: 2066 actgaacacggtcgtaggtcgtatcagactcctcgacgaatgacattccactatgaccag 2125
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 434 actgaacacggtcgtaggtcgtatcaaactcctcgacgcatgacattccactatgaccag 493
Query: 2126 ggagggtgacttttcgttttatcgtttataagttacgtaaacatgcgcccgctaagtgca 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggagggtgacttttcgttttatcgtttataagttacgtaaacatgcgcccgctaagtgca 553
Query: 2186 atactgcggtatggagattcctgaattttacactatgttaaatgtgtgacaataaggcga 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atactgcggtatggagattcctgaattttacactatgttaaatgtgtgacaataaggcga 613
Query: 2246 agagaaaaatattttgagaaaaaaaagaaaaa 2277
|||||||||||||||||||||||||| |||||
Sbjct: 614 agagaaaaatattttgagaaaaaaaaaaaaaa 645
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,749
Number of extensions: 4508
Number of successful extensions: 4508
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4508
Number of HSP's successfully gapped: 1
Length of query: 2359
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2342
Effective length of database: 8,119,229
Effective search space: 19015234318
Effective search space used: 19015234318
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)