BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17038 (UTR included)
(2754 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2G05 478 e-134
BF01043B1A11 347 6e-95
>BF01037B2G05
Length = 785
Score = 478 bits (241), Expect = e-134
Identities = 250/253 (98%)
Strand = Plus / Plus
Query: 1947 tcccgataaagaaggagcggctcacgggcagctctactgggacgacggagacagcatcaa 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 tcccgataaagaaggagcggctcacgggcagctctactgggacgacggagacagcatcaa 91
Query: 2007 tacctatgaagagaaaaagtatagccacatcgatttcattgtgaagaacaatgagctaca 2066
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tacctatgaagagaaaaaatatagccacatcgatttcattgtgaagaacaatgagctaca 151
Query: 2067 gaatatagtacagtggtggggatatggggttccatctctcaactctatctccatactggg 2126
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 152 gaatataatacagtggtggggatatggtgttccatctctcaactctatctccatactggg 211
Query: 2127 gatgaagcccttaaagtccttgaccatcaacgacatccccaccaaatacacatatattaa 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gatgaagcccttaaagtccttgaccatcaacgacatccccaccaaatacacatatattaa 271
Query: 2187 caaaacccaagtg 2199
|||||||||||||
Sbjct: 272 caaaacccaagtg 284
>BF01043B1A11
Length = 831
Score = 347 bits (175), Expect = 6e-95
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 2311 atagatccaggtgtgttcatcttcagccgccttttgccatgtgcgttacgtcacgtgtcc 2370
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 502 atagatccaggtgtgttcatcttcagccgccttttgccgtgtgcgttacgtcacgtgtcc 561
Query: 2371 ctccccccggccgccactcacaccgctctgagctcgcgggcgtctgaactacgctatctg 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctccccccggccgccactcacaccgctctgagctcgcgggcgtctgaactacgctatctg 621
Query: 2431 agatgtctgtctgatacactgctgccatatctcctacgaccggcagattgtcataatga 2489
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agatgtctgtctgatacactgctgccatatctcctacgaccggcagattgtcataatga 680
Score = 220 bits (111), Expect = 9e-57
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 2200 atttgtaatgcctgtgatgctcctaactgcagtcgccatgatccagaactattacccgat 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atttgtaatgcctgtgatgctcctaactgcagtcgccatgatccagaactattacccgat 318
Query: 2260 ccctgggtcggattactcattcataaacaattggaccaggctatagaagat 2310
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccctgggtcggattactcattcataaacaattggaccaggctatagaagat 369
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,522
Number of extensions: 4912
Number of successful extensions: 4912
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4912
Number of HSP's successfully gapped: 3
Length of query: 2754
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2737
Effective length of database: 8,119,229
Effective search space: 22222329773
Effective search space used: 22222329773
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)