BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08438 (UTR included)
(1642 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_623_C1 2242 0.0
>BF14_623_C1
Length = 1327
Score = 2242 bits (1131), Expect = 0.0
Identities = 1143/1146 (99%), Gaps = 2/1146 (0%)
Strand = Plus / Plus
Query: 497 aaaaatgtcatctggaccatacaactactcatacatttttaaatatataattattggtga 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aaaaatgtcatctggaccatacaactactcatacatttttaaatatataattattggtga 126
Query: 557 tatgggagttgggaaatcatgtctgttacatcagtttacagagaaaaaatttatggcaga 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tatgggagttgggaaatcatgtctgttacatcagtttacagagaaaaaatttatggcaga 186
Query: 617 ttgtcctcacactattggtgtagaatttgggacaagaataattgaggtagctggccaaaa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttgtcctcacactattggtgtagaatttgggacaagaataattgaggtagctggccaaaa 246
Query: 677 aattaagctccagatttgggacacagctggtcaagagagattcagagcagtgactcgttc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aattaagctccagatttgggacacagctggtcaagagagattcagagcagtgactcgttc 306
Query: 737 atactacagaggggctgctggagccctgatggtatatgatataacaagaaggtcgacata 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atactacagaggggctgctggagccctgatggtatatgatataacaagaaggtcgacata 366
Query: 797 caatcaccttagtagctggttaacagatacccgcaatctgactaaccccagcactgtgat 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caatcaccttagtagctggttaacagatacccgcaatctgactaaccccagcactgtgat 426
Query: 857 ttttcttattggcaacaagtccgatttagatggacaaagagatgtaacatatgaagaagc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttttcttattggcaacaagtccgatttagatggacaaagagatgtaacatatgaagaagc 486
Query: 917 aaagcagtttgcagatgaaaatggtttgatgtttgttgaagccagtgctaaaactggcca 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaagcagtttgcagatgaaaatggtttgatgtttgttgaagccagtgctaaaactggcca 546
Query: 977 gaacgtagaagaagctttcttggagactgcaaaaaaaatatatcagagcattcaagatgg 1036
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaatgtagaagaagctttcttggagactgcaaaaaaaatatatcagagcattcaagatgg 606
Query: 1037 tcgattagatctgaacgcggccgagtcgggagtacaacacaaacctgcatctacaggtcg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tcgattagatctgaacgcggccgagtcgggagtacaacacaaacctgcatctacaggtcg 666
Query: 1097 cccactggccgcgcccccggctaagaacgacaactgcgcctgctaaccgccctccctcac 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cccactggccgcgcccccggctaagaacgacaactgcgcctgctaaccgccctccctcac 726
Query: 1157 actatcacactatcttaagctgtaagtatattagtttataactgctgtaattatatccat 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 actatcacactatcttaagctgtaagtatattagtttataactgctgtaattatatccat 786
Query: 1217 gataaaattattttttgacacatgtagagcggttgatatatctgtactgattgtaaatat 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gataaaattattttttgacacatgtagagcggttgatatatctgtactgattgtaaatat 846
Query: 1277 ctgtacacaatattactgttttatgttataattttgtaattagtgtttgtgttatgcaaa 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ctgtacacaatattactgttttatgttataattttgtaattagtgtttgtgttatgcaaa 906
Query: 1337 gtattgctattaataatgggtacactaatctcattcacattccacatttaattggggtta 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gtattgctattaataatgggtacactaatctcattcacattccacatttaattggggtta 966
Query: 1397 ttatggaaacttacatgtaagttaaaatgtcatgtaataatagtagtctttacagtaaaa 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ttatggaaacttacatgtaagttaaaatgtcatgtaataatagtagtctttacagtaaaa 1026
Query: 1457 taatcattaggaaaaatactaaaggtgacaacaggtgacttcatatatatatatatatat 1516
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1027 taatcattaggaaaaatactaaaggtgacaacaggtgacttc--atatatatatatatat 1084
Query: 1517 atatataatatataatataaagttaatattaaatggattgtatctatagcataccaatga 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 atatataatatataatataaagttaatattaaatggattgtatctatagcataccaatga 1144
Query: 1577 ttttaatgttatggaggagaaaagtatttctggtttatattttgatgtgtttcctagtgt 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 ttttaatgttatggaggagaaaagtatttctggtttatattttgatgtgtttcctagtgt 1204
Query: 1637 aatgat 1642
||||||
Sbjct: 1205 aatgat 1210
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 acaaattcttagttcagttcctaccgacgttgattaacaaa 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 acaaattcttagttcagttcctaccgacgttgattaacaaa 66
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,525
Number of extensions: 15034
Number of successful extensions: 15034
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15021
Number of HSP's successfully gapped: 2
Length of query: 1642
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1625
Effective length of database: 8,119,229
Effective search space: 13193747125
Effective search space used: 13193747125
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)