BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14306 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1613_C1 1433 0.0
>BF14_1613_C1
Length = 1408
Score = 1433 bits (723), Expect = 0.0
Identities = 729/731 (99%)
Strand = Plus / Plus
Query: 714 ggcttggtgatggctggtttgggtgatttgacacgaccagttgagagcttatccatacca 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggcttggtgatggctggtttgggtgatttgacacgaccagttgagagcttatccatacca 266
Query: 774 caatcagcttccctcgcagccacaggaatcatctggtcacgatactcactcgtcatcata 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caatcagcttccctcgcagccacaggaatcatctggtcacgatactcactcgtcatcata 326
Query: 834 ccgaaaaactatagcttattcgctgttaacgtttttgtggccatcactagtgtatatcag 893
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 327 ccgaaaaactatagcttattcgctgttaacgtttttgtggccatcactagcgtatatcag 386
Query: 894 atatcacgagcgattaggcatcaacagtctctaaagaaggcggaaaagtgatgagagacg 953
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atatcacgagcgattagacatcaacagtctctaaagaaggcggaaaagtgatgagagacg 446
Query: 954 gttgtttgtatcatgcgatgtagatatattagttctggggtagaaagaatttcattttgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttgtttgtatcatgcgatgtagatatattagttctggggtagaaagaatttcattttgt 506
Query: 1014 atacatgtaacatggttattcagaattattgtcatagctcaaatctgtgacatgttacga 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atacatgtaacatggttattcagaattattgtcatagctcaaatctgtgacatgttacga 566
Query: 1074 atattgaaacgtcactgtcatgacaagtctaattaatgtcaaatacatattcacttgtga 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atattgaaacgtcactgtcatgacaagtctaattaatgtcaaatacatattcacttgtga 626
Query: 1134 tatagaatatgtgatattcttcatttagttcaatattttttataactatcgtgtttattt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tatagaatatgtgatattcttcatttagttcaatattttttataactatcgtgtttattt 686
Query: 1194 tatattcttagtattgtctcatgatctacactggttatttatatcatattataatattgt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tatattcttagtattgtctcatgatctacactggttatttatatcatattataatattgt 746
Query: 1254 tttgacgtttgtttacatttgacaaatatattttagatatataatatatattgattttca 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttgacgtttgtttacatttgacaaatatattttagatatataatatatattgattttca 806
Query: 1314 ttcattacacattttcagatttttgatcatatcatatttgttatcatatcattaaaattg 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttcattacacattttcagatttttgatcatatcatatttgttatcatatcattaaaattg 866
Query: 1374 tttggaatgtgaattgatgcagtgaaacatcatttaacgataaaatatttaaccctaaaa 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tttggaatgtgaattgatgcagtgaaacatcatttaacgataaaatatttaaccctaaaa 926
Query: 1434 tccccaaattt 1444
|||||||||||
Sbjct: 927 tccccaaattt 937
Score = 410 bits (207), Expect = e-114
Identities = 228/235 (97%)
Strand = Plus / Plus
Query: 421 taagaaatttgtagtagtcgtagtttatattacatttcaatatataaaattctcagttcg 480
|||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 1 taagaaatttgtagtagtcgtagtttttattacatttcaatatataaaattataagttcg 60
Query: 481 tcagataaggaactactaaaatgtctaagttatacaaggcagtagtaaacacggccgaca 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tcagataaggaactactaaaatgtctaagttatacaaggcagtagtaaacacagccgaca 120
Query: 541 aatttgtgccttcacaattacgacctctttgggaacatgcagctggaccgaaaactattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttgtgccttcacaattacgacctctttgggaacatgcagctggaccgaaaactattt 180
Query: 601 tcttctgggctccagcctttaaatggggcttagttgtggctggtttgggtgattt 655
||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 181 tcttctgggctccagcctttaaatggggcttggtgatggctggtttgggtgattt 235
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,469
Number of extensions: 6048
Number of successful extensions: 6048
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6048
Number of HSP's successfully gapped: 2
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)