BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20617 (UTR included)
(2586 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2A09 991 0.0
BF01005B2A07 660 0.0
>BF01057B2A09
Length = 822
Score = 991 bits (500), Expect = 0.0
Identities = 500/500 (100%)
Strand = Plus / Plus
Query: 211 gatattattggatttattatttttattatttaattacattcgttaaaaatatgttaaatt 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatattattggatttattatttttattatttaattacattcgttaaaaatatgttaaatt 60
Query: 271 ttgaaaaatcattatcgaaagcgacataatagtgctgaaaccagttatggatgaaaaaac 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaaaatcattatcgaaagcgacataatagtgctgaaaccagttatggatgaaaaaac 120
Query: 331 gaaaatggctagcggttccgcagttttgaaagaaagcggagaagaaggtgctaaaggtcc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaatggctagcggttccgcagttttgaaagaaagcggagaagaaggtgctaaaggtcc 180
Query: 391 tcagaacgctaagcgagatctggaagaggagtttaacgtgcaaagagctaaaatgaaaga 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagaacgctaagcgagatctggaagaggagtttaacgtgcaaagagctaaaatgaaaga 240
Query: 451 gttattcttacagaaagaagaggatctccgtcaactggtgctagagaagcagcaactgga 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttattcttacagaaagaagaggatctccgtcaactggtgctagagaagcagcaactgga 300
Query: 511 ctctgaggtgttggggctacgggaggagctgcaacaactgcaaacactcagtgagaacca 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctctgaggtgttggggctacgggaggagctgcaacaactgcaaacactcagtgagaacca 360
Query: 571 gaagtcagagatacagagcttacagatgttagtcagtgagacagtggaggcatcttcatc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagtcagagatacagagcttacagatgttagtcagtgagacagtggaggcatcttcatc 420
Query: 631 gggctccgaggaggtgaggaggctccgagctcggaacgtcgacttggaacaacagctcgc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggctccgaggaggtgaggaggctccgagctcggaacgtcgacttggaacaacagctcgc 480
Query: 691 acaacttagacaacaacagg 710
||||||||||||||||||||
Sbjct: 481 acaacttagacaacaacagg 500
Score = 541 bits (273), Expect = e-153
Identities = 289/295 (97%)
Strand = Plus / Plus
Query: 708 aggagcttcccctggcgcccgccaccttcgtgcggtcgttggcgcgcaaactgggagcgg 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aggagcttcccctggcgcccgccaccttcgtgcggtcgttggcgcgcaaactgggagcgg 587
Query: 768 agccggaggagccaccgccgcccaggaaggccgaggacgagctgctgcagagcatcatac 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agccggaggagccaccgccgcccaggaaggccgaggacgagctgctgcagagcatcatac 647
Query: 828 agccgctcgagctggagatcggcgcgctcaagaacaagctgcgggagaacgacgctctgc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agccgctcgagctggagatcggcgcgctcaagaacaagctgcgggagaacgacgctctgc 707
Query: 888 tacaggatgctctgaaatccaaagtagcagctcccaacacctcgggggccgtggccagcg 947
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 708 tacaggatgctctgaaatccaaagtagcagcctccaacacctcgggcgccgtggccagcg 767
Query: 948 gcggcgactctaaacctgaaacggagagccgcggctgtgacatgtgcgccaacta 1002
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 768 gcggcgactctaaaccagaaacggnnagccgcggctgtgacatgtgcgccaacta 822
>BF01005B2A07
Length = 664
Score = 660 bits (333), Expect = 0.0
Identities = 355/364 (97%)
Strand = Plus / Minus
Query: 2223 tatttaaaataataaaatagaacaccgccttatcgaacataaaatgtaaggagatttaaa 2282
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 635 tatttaaaataataaaatagaacaccgccttnncgaacataaaatgtaaggagatttaaa 576
Query: 2283 tggccatccatcttccatatattgttaggaagtatacattagtttaatacacattcaaca 2342
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 575 tggccatccannntccatatattgttaggaagtatacattagtttaatacccattcaaca 516
Query: 2343 aggcggtgtctggcgactccctgtgggcggctcggcgtgtggttgtgcgaaacaaaaacg 2402
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aggcggtgtctggggactccctgtgggcggctcggcgtgtggttgtgcgaaacaaaaacg 456
Query: 2403 agcaatgactgtagcggtgttatttactcaacttgacgatcggtgcaacaatttaggttc 2462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agcaatgactgtagcggtgttatttactcaacttgacgatcggtgcaacaatttaggttc 396
Query: 2463 aaacaagtcttgtcaaggtattacgaatgtatccgagatcctctgtatcgcgtcgtcttg 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaacaagtcttgtcaaggtattacgaatgtatccgagatcctctgtatcgcgtcgtcttg 336
Query: 2523 atcgaagacctgtaaagatacaccagtagcgagctagtgctgtagtggggaagcctgttc 2582
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 335 atcgaagacctgtaaagataccccagtagcgagctagtgctgtagtggggaagcctgttt 276
Query: 2583 tgcc 2586
||||
Sbjct: 275 tgcc 272
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,402
Number of extensions: 4695
Number of successful extensions: 4695
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4695
Number of HSP's successfully gapped: 3
Length of query: 2586
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2569
Effective length of database: 8,119,229
Effective search space: 20858299301
Effective search space used: 20858299301
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)