BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10141 (UTR included)
(1906 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2G06 1384 0.0
BF01047A1G09 1082 0.0
BF01019A1H08 86 2e-16
BF01016B1E06 70 1e-11
>BF01010A2G06
Length = 764
Score = 1384 bits (698), Expect = 0.0
Identities = 741/756 (98%), Gaps = 7/756 (0%)
Strand = Plus / Plus
Query: 266 tgagtccaagtttaattccatgtaatgaatttttacattgtaaagattgaataatttgta 325
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 9 tgagtccaagtttaattccatgtaatgaatttttacattgtgaacattgaataatttgta 68
Query: 326 aatataaaatattaggagtgagtttgtgatgtacaaaaattaagtgagaacaaacat--- 382
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 69 aacataaaatattaggagtgagtttgtgatgtataaaaattaagtgagaacaaacatatt 128
Query: 383 ----ttcataataaaacatcgcatttttattaattaaaatttttatttatacgtaaactg 438
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 129 tcatttcataataaaacatcgcatttttattaattaaaattttaatttatacgtaaattg 188
Query: 439 tttttgttgtgcgtaataaaaaggatgtataattgaaaaccatggcttacattaggggta 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tttttgttgtgcgtaataaaaaggatgtataattgaaaaccatggcttacattaggggta 248
Query: 499 cgatgaaaaaaagattgaaagtgctaagcagtcttaacagctattgtatctgcgattatt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cgatgaaaaaaagattgaaagtgctaagcagtcttaacagctattgtatctgcgattatt 308
Query: 559 gtttaagaaaattcgaaagcaaaccaatacttatatctcacatagaaacgtgcgtccagg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtttaagaaaattcgaaagcaaaccaatacttatatctcacatagaaacgtgcgtccagg 368
Query: 619 acagaacgtgcaaagtatgcaatataattttcgaaaacgaaggaattttcctcgctcaca 678
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 369 acagaacgtgcaaagtatgcaatataattttcgaaaacgaaggaatcttcctcgctcaca 428
Query: 679 taagaaacgtacatataaagagcgaaaagttggattttaccagtagccttaacaaatatt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 taagaaacgtacatataaagagcgaaaagttggattttaccagtagccttaacaaatatt 488
Query: 739 gcttgtgcaatcattgctctaaaaaattccaaaataaactaaagctggcgaaacatgtgg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gcttgtgcaatcattgctctaaaaaattccaaaataaactaaagctggcgaaacatgtgg 548
Query: 799 aaaactgtattgaaaacaggacatgcaagtggtgcaatctggtgttcaagaatcgtggga 858
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 549 aaaactgtattgaaaacaggacatgcaagtggtgcaatctgctgttcaagaatcgtggga 608
Query: 859 atttggttactcatgcatatcacatacatggagatagaagcaacaaaagggaatccagac 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atttggttactcatgcatatcacatacatggagatagaagcaacaaaagggaatccagac 668
Query: 919 agaacttggagaagatgacctgtaagccctgcaacagaactttctcagagtacttccgct 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 agaacttggagaagatgacctgtaagccctgcaacagaactttctcagagtacttccgct 728
Query: 979 tgaagtaccacataaggagtgtccacttcaatctga 1014
||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgaagtaccacataaggagtgtccacttcaatctga 764
>BF01047A1G09
Length = 841
Score = 1082 bits (546), Expect = 0.0
Identities = 580/592 (97%), Gaps = 7/592 (1%)
Strand = Plus / Plus
Query: 314 gaataatttgtaaatataaaatattaggagtgagtttgtgatgtacaaaaattaagtgag 373
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9 gaataatttttaaatataaaatattaggagtgagtttgtgatgtataaaaattaagtgag 68
Query: 374 aacaaacat-------ttcataataaaacatcgcatttttattaattaaaatttttattt 426
||||||||| |||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 69 aacaaacatatttcatttcataataaaagatcgcatttttattaattaaaattttaattt 128
Query: 427 atacgtaaactgtttttgttgtgcgtaataaaaaggatgtataattgaaaaccatggctt 486
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atacgtaaattgtttttgttgtgcgtaataaaaaggatgtataattgaaaaccatggctt 188
Query: 487 acattaggggtacgatgaaaaaaagattgaaagtgctaagcagtcttaacagctattgta 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acattaggggtacgatgaaaaaaagattgaaagtgctaagcagtcttaacagctattgta 248
Query: 547 tctgcgattattgtttaagaaaattcgaaagcaaaccaatacttatatctcacatagaaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tctgcgattattgtttaagaaaattcgaaagcaaaccaatacttatatctcacatagaaa 308
Query: 607 cgtgcgtccaggacagaacgtgcaaagtatgcaatataattttcgaaaacgaaggaattt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cgtgcgtccaggacagaacgtgcaaagtatgcaatataattttcgaaaacgaaggaattt 368
Query: 667 tcctcgctcacataagaaacgtacatataaagagcgaaaagttggattttaccagtagcc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tcctcgctcacataagaaacgtacatataaagagcgaaaagttggattttaccagtagcc 428
Query: 727 ttaacaaatattgcttgtgcaatcattgctctaaaaaattccaaaataaactaaagctgg 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttaacaaatattgcttgtgcaatcattgctctaaaaaattccaaaataaactaaagctgg 488
Query: 787 cgaaacatgtggaaaactgtattgaaaacaggacatgcaagtggtgcaatctggtgttca 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cgaaacatgtggaaaactgtattgaaaacaggacatgcaagtggtgcaatctggtgttca 548
Query: 847 agaatcgtgggaatttggttactcatgcatatcacatacatggagatagaag 898
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agaatcgtgggaatttggttactcatgcatatcacatacatggagatagaag 600
>BF01019A1H08
Length = 504
Score = 85.7 bits (43), Expect = 2e-16
Identities = 108/129 (83%), Gaps = 13/129 (10%)
Strand = Plus / Plus
Query: 1786 cttaacattcaatggattgactgtgcgggtgccgggtccatcgc--tgcagggagaggag 1843
|||| ||||||||||||| || |||||||||||||||||||||| ||||||||||||||
Sbjct: 376 cttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggag 435
Query: 1844 c---------gccttggacttgcgaaccaggtgtaggtttaagaggcccctatcta--ac 1892
| |||| ||| |||||| ||||||||||||||||| ||| |||||||| ||
Sbjct: 436 cttcaacagtgcctgggagttgcgacccaggtgtaggtttaaggggctcctatctaagac 495
Query: 1893 gcgttaaac 1901
|||||||||
Sbjct: 496 gcgttaaac 504
>BF01016B1E06
Length = 606
Score = 69.9 bits (35), Expect = 1e-11
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 1856 gcgaaccaggtgtaggtttaagaggcccctatctaacgcgttaaacgctca 1906
|||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 230 gcgacccaggtgtaggtttaaggggccc-tatctaacgcgttaaacgctca 279
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,845
Number of extensions: 7566
Number of successful extensions: 7566
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7564
Number of HSP's successfully gapped: 6
Length of query: 1906
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1889
Effective length of database: 8,119,229
Effective search space: 15337223581
Effective search space used: 15337223581
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)