BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03228 (UTR included)
(1744 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1C05 1237 0.0
>BF01053A1C05
Length = 640
Score = 1237 bits (624), Expect = 0.0
Identities = 636/640 (99%)
Strand = Plus / Plus
Query: 295 atcattgatacgcgggttgtgaataagaaagtagtattgctaagacctcagcagtataag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcattgatacgcgggttgtgaataagaaagtagtattgctaagacctcagcagtataag 60
Query: 355 aaaaaaaaaaacaagttcctattgccaaattgtgaatttcagaagtgatttaaagccgac 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 aaaaaaaaaaacaagttcctattgccaaattgtgaatttcagaagtgatttaaaaacgac 120
Query: 415 tactttttctgtttcaatttattcttacgagtttagaggaacatttatttttatttagtt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactttttctgtttcaatttattcttacgagtttagaggaacatttatttttatttagtt 180
Query: 475 ttattatcatactatacaaagtaatgatggatatcattaagagcggagataatgttttat 534
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttattatcatactatacaaattaatgatggatatcattaagagcggagataatgttttat 240
Query: 535 tgatctggaataacaacgaacccagcgaaattagcaatttagttaaagaaatacagtcta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatctggaataacaacgaacccagcgaaattagcaatttagttaaagaaatacagtcta 300
Query: 595 ttcagaatgtttccgtagctatggagaactcgaatatgatagctgaaggatcaagaccac 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcagaatgtttccgtagctatggagaactcgaatatgatagctgaaggatcaagaccac 360
Query: 655 aagcatcatttgatgtggtaatgtcgaactggctccaaccaaattcagtggaacacacag 714
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcatcatttgatgtggtaatatcgaactggctccaaccaaattcagtggaacacacag 420
Query: 715 acagtttgctttcaattattataaagctgctcaaacccagtggtaaattaatactaaaag 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagtttgctttcaattattataaagctgctcaaacccagtggtaaattaatactaaaag 480
Query: 775 accaaaaagatatttgttcacctttaaaactcaatggttttcttaatgtcatcaataatg 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accaaaaagatatttgttcacctttaaaactcaatggttttcttaatgtcatcaataatg 540
Query: 835 gtgatcattattcggccgagaagcctaagtttgaggtcggctccaaagcatctcttaaac 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgatcattattcggccgagaagcctaagtttgaggtcggctccaaagcatctcttaaac 600
Query: 895 ttaagaagccagctgtgtggaagttagatgatactgtaga 934
||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaagaagccagctgtgtggaagttagatgatactgtaga 640
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,620
Number of extensions: 6256
Number of successful extensions: 6256
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6256
Number of HSP's successfully gapped: 1
Length of query: 1744
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1727
Effective length of database: 8,119,229
Effective search space: 14021908483
Effective search space used: 14021908483
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)