BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11983 (UTR included)
(2590 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2548_C1 1875 0.0
>BF14_2548_C1
Length = 987
Score = 1875 bits (946), Expect = 0.0
Identities = 976/987 (98%)
Strand = Plus / Plus
Query: 504 ttttcaatatattttattttagcgtttcttttcattcatacaggctgtgctgctgtcctg 563
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ttttcaatatattttattttagcgtttcttnnntttcatacaggctgtgctgctgtcctg 60
Query: 564 ggcgaggatggagtcgtgtggcccaaggagtatcatttgaaaggcgaaataactttcatg 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgaggatggagtcgtgtggcccaaggagtatcatttgaaaggcgaaataactttcatg 120
Query: 624 agcgtaggactccaggagccgtttgaaatctggtatagtgctgcagaaaataagtccagg 683
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 agtgtaggactccaggagccgtttgaaatctggtatagtgctgcagaaaataagtcgagg 180
Query: 684 attgatttttacgatggcaccgtgaagaggtacgtcatcggggaggaggaggacgacggt 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgatttttacgatggcaccgtgaagaggtacgtcatcggggaggaggaggacgacggt 240
Query: 744 gaagaatataaggtatttccggtgttcattgacaaggagatgaccgtcatgtgtgtgaga 803
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 gaagaatataaggtatttccggtgttcattgataaggagatgaccgtcatgtgtgtgaga 300
Query: 804 gaaccaacagacggggagtctatggactttttaatagatcctagtaattttacatatttc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaccaacagacggggagtctatggactttttaatagatcctagtaattttacatatttc 360
Query: 864 gacacaacgtcatataatggaaaaacggttcaggtgtggaagagtattgaagtggaatta 923
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatacaacgtcatataatggaaaaacggttcaggtgtggaagagtattgaagtggaatta 420
Query: 924 aacgaacagaaagtcgaaaaagtgttgtttgtgtataaacaagatgggtttcatgtgccg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacgaacagaaagtcgaaaaagtgttgtttgtgtataaacaagatgggtttcatgtgccg 480
Query: 984 ataagagttgaagaaatcaaacataatctatggacgggtgctttagagggacataaaatt 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataagagttgaagaaatcaaacataatctatggacgggtgctttagagggacataaaatt 540
Query: 1044 accaccttctacgattacaggaaaccgacaaaggacgacttcaatgtcgccttagtgact 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accaccttctacgattacaggaaaccgacaaaggacgacttcaatgtcgccttagtgact 600
Query: 1104 gaatgtgaagacgccactgacttttacaaagacctgcgcgtgcttcatccgatgatacct 1163
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 601 gaatgtgaagacgccactgacttttacaaagacctgcgcgtgcttcatcccatgatacct 660
Query: 1164 tccgatgtggataggctctatcacagttatacaaagcatcacaacagaaactacaaagct 1223
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 661 tccgatgtggataggctctatcacagttacacaaagcatcacaacagaaactacaaagct 720
Query: 1224 gaagagcatagtttgcgtaaatcaatattagaacagaattggcagcgcgtcctccttcac 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaagagcatagtttgcgtaaatcaatattagaacagaattggcagcgcgtcctccttcac 780
Query: 1284 aacaaaaaaaacttaggcttcaagttgactctcaacaaatattctgatcgcactaaggaa 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aacaaaaaaaacttaggcttcaagttgactctcaacaaatattctgatcgcactaaggaa 840
Query: 1344 gaactatccttcctaactggcacgagaccctcattagggacaggcaccgtctcctttccg 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaactatccttcctaactggcacgagaccctcattagggacaggcaccgtctcctttccg 900
Query: 1404 cacactgatgaggaagtggaacagatggtgttggatcttcctgagaattatgatatgagg 1463
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 901 cacactgatgaggaagtggaacagatggtgttggatcttcctgagaactatgatatgagg 960
Query: 1464 ctggaaggaactattagtgcagtcaag 1490
|||||||||||||||||||||||||||
Sbjct: 961 ctggaaggaactattagtgcagtcaag 987
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,417
Number of extensions: 5031
Number of successful extensions: 5031
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5030
Number of HSP's successfully gapped: 1
Length of query: 2590
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2573
Effective length of database: 8,119,229
Effective search space: 20890776217
Effective search space used: 20890776217
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)