BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14835 (UTR included)
(1335 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2A10 309 6e-84
BF14_729_C3 70 1e-11
>BF01022B2A10
Length = 755
Score = 309 bits (156), Expect = 6e-84
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 342 cagatttagatgacgaccctatgtcagaccaagagggtgaaaatggaaatgaacaaatag 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cagatttagatgacgaccctatgtcagaccaagagggtgaaaatggaaatgaacaaatag 133
Query: 402 ccgaatcggatcccaagcttgaagttgagaaaccaaaagttgttgagaaaaaaattgaat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccgaatcggatcccaagcttgaagttgagaaaccaaaagttgttgagaaaaaaattgaat 193
Query: 462 ctataacatctttacagcaagatgaaatacaaagag 497
||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctataacatctttacagcaagatgaaatacaaagag 229
>BF14_729_C3
Length = 2041
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1222 ccgtgatcacggttgctgcaaagtaacggattcttcgggagtatgtag--ttaaaataat 1279
||||||||||||||||||||||||||| || | |||||| ||||||| || |||||||
Sbjct: 1598 ccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataat 1657
Query: 1280 aaaaaccgcgtagt 1293
|||| |||||||||
Sbjct: 1658 aaaatccgcgtagt 1671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,119
Number of extensions: 10338
Number of successful extensions: 10338
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10337
Number of HSP's successfully gapped: 2
Length of query: 1335
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1318
Effective length of database: 8,119,229
Effective search space: 10701143822
Effective search space used: 10701143822
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)