BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03977 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1F03 311 2e-84
BF01021A2F10 100 1e-20
BF01025A1H05 90 1e-17
BF01038A2H08 86 2e-16
BF14_1341_C1 84 7e-16
BF14_433_C1 72 3e-12
BF01044B2C02 70 1e-11
BF01010B2F01 70 1e-11
>BF01009A1F03
Length = 799
Score = 311 bits (157), Expect = 2e-84
Identities = 160/161 (99%)
Strand = Plus / Minus
Query: 1296 gataaaatttataatttgatatattaaaactagtgagaggcaaaggtaagttgtaacgca 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gataaaatttataatttgatatattaaaactagtgagaggcaaaggtaagttgtaacgca 740
Query: 1356 aatataaaagtgctcttttagagttaaattttattaagtagaaaactttcgcgttgaaaa 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aatataaaagtgctcttttagagttaaattttattaagtagaaaactttcgcgttgaaaa 680
Query: 1416 ttagaagataaagaaattttaaaggtaaatgttttccaaat 1456
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 679 ttagaagataaagaaatttaaaaggtaaatgttttccaaat 639
>BF01021A2F10
Length = 792
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 117 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaat 166
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaat 46
>BF01025A1H05
Length = 756
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 117 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 165
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 294 gctcaaaaggactcgtatccagagccctaaaaacatttacaaaaaaaaa 246
>BF01038A2H08
Length = 781
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 118 ctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 164
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 525 ctcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaaaa 479
>BF14_1341_C1
Length = 1009
Score = 83.8 bits (42), Expect = 7e-16
Identities = 49/50 (98%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 117 gctcaaaaggactcgtatccagagccgt-aaaaacatttacaaaaaaaaa 165
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 945 gctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaaaaa 994
>BF14_433_C1
Length = 2144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 122 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 165
||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 1626 aaaggactcgtatccagagccgtaataacatttgcaaaaaaaaa 1583
>BF01044B2C02
Length = 774
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 122 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 164
|||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 102 aaagtactcgtatccagagccgtaaaagcatttacaaaaaaaa 144
>BF01010B2F01
Length = 839
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 122 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 164
||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 553 aaaggactcgtattcagagccgtaaaaacatttacaataaaaa 511
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,529
Number of extensions: 5808
Number of successful extensions: 5808
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5807
Number of HSP's successfully gapped: 8
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)