BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04034 (UTR included)
(2644 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1B06 733 0.0
>BF01060B1B06
Length = 824
Score = 733 bits (370), Expect = 0.0
Identities = 370/370 (100%)
Strand = Plus / Plus
Query: 2275 gttatttatatctgaatttacatttctttgttcaacataattgagtttacatgttgaaat 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttatttatatctgaatttacatttctttgttcaacataattgagtttacatgttgaaat 60
Query: 2335 acataacgtatgattatttcatacaagttgatgcaagtaaatctgttggtatctatcact 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acataacgtatgattatttcatacaagttgatgcaagtaaatctgttggtatctatcact 120
Query: 2395 atttcatattggaacaataaatctcgttgtgaacaacacactgagctaaaccgccgccaa 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttcatattggaacaataaatctcgttgtgaacaacacactgagctaaaccgccgccaa 180
Query: 2455 caggacgctgtagtctgtaccctcctagtagtcactattgaaatattctcacatagaatt 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggacgctgtagtctgtaccctcctagtagtcactattgaaatattctcacatagaatt 240
Query: 2515 cttagtttgagcataaattattaccatcacacatactttgttagttactgatattaacaa 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttagtttgagcataaattattaccatcacacatactttgttagttactgatattaacaa 300
Query: 2575 tacatatgtatgtaacattttaaatttaaaggataaaattcttgttgtttttgtaaagtt 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacatatgtatgtaacattttaaatttaaaggataaaattcttgttgtttttgtaaagtt 360
Query: 2635 tatttcgtta 2644
||||||||||
Sbjct: 361 tatttcgtta 370
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,250
Number of extensions: 6194
Number of successful extensions: 6194
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6194
Number of HSP's successfully gapped: 1
Length of query: 2644
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2627
Effective length of database: 8,119,229
Effective search space: 21329214583
Effective search space used: 21329214583
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)