BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13364 (UTR included)
(2079 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2A02 1041 0.0
>BF01020B2A02
Length = 727
Score = 1041 bits (525), Expect = 0.0
Identities = 528/529 (99%)
Strand = Plus / Plus
Query: 1053 aatcctacaacaaaattaatagatttgagacattatgttatcagagcgacacctgtcgga 1112
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11 aatcctacaacaaaattaatagatttgagacattatgttatcagagcgacgcctgtcgga 70
Query: 1113 ctaaacaaaggaactaagaagatggtacaagggaagatacctaatttgaacaaatgcaag 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ctaaacaaaggaactaagaagatggtacaagggaagatacctaatttgaacaaatgcaag 130
Query: 1173 gacatgtcagaattttttgataaggcagctttattatcagagagtgaatttgaagatgat 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gacatgtcagaattttttgataaggcagctttattatcagagagtgaatttgaagatgat 190
Query: 1233 ggtacgaaccaggttgttttgccacaaaagctgtcgaaccgagctgcagcgatgcacacc 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggtacgaaccaggttgttttgccacaaaagctgtcgaaccgagctgcagcgatgcacacc 250
Query: 1293 aagtcggcactcagacttgtggagctcggaccaaggatgtcattgcagcttataaaggtt 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagtcggcactcagacttgtggagctcggaccaaggatgtcattgcagcttataaaggtt 310
Query: 1353 gaggacggccttatggatggggaggttttgttccatgaactcgtagagaaaacggaagag 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaggacggccttatggatggggaggttttgttccatgaactcgtagagaaaacggaagag 370
Query: 1413 gaaaaggccctgattaagaagaaacgtgaagagaaacgacgcttgaaagagaagagaaag 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaaaaggccctgattaagaagaaacgtgaagagaaacgacgcttgaaagagaagagaaag 430
Query: 1473 gcacagcaagcggagaacattaaacggaaggagaaggaaaaagaagaattaaaacaaaaa 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gcacagcaagcggagaacattaaacggaaggagaaggaaaaagaagaattaaaacaaaaa 490
Query: 1533 gctttagagggaattaaaaagaaacaggaaatgactgaaaatcaaaggt 1581
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gctttagagggaattaaaaagaaacaggaaatgactgaaaatcaaaggt 539
Score = 198 bits (100), Expect = 3e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1799 aggttaatggagctggcggctgcggagactcaggataatgatcaggatgaagacgacgcg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aggttaatggagctggcggctgcggagactcaggataatgatcaggatgaagacgacgcg 595
Query: 1859 gattactatcgacaggaagtgggagaggaaccggaacaag 1898
||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gattactatcgacaggaagtgggagaggaaccggaacaag 635
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,487
Number of extensions: 6863
Number of successful extensions: 6863
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6863
Number of HSP's successfully gapped: 2
Length of query: 2079
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2062
Effective length of database: 8,119,229
Effective search space: 16741850198
Effective search space used: 16741850198
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)