BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11663 (UTR included)
(4345 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1B07 1080 0.0
>BF01034A1B07
Length = 719
Score = 1080 bits (545), Expect = 0.0
Identities = 568/575 (98%), Gaps = 1/575 (0%)
Strand = Plus / Plus
Query: 2227 cgaaaatggccaatccttacgaacccatcagaatgggctacaagacgtccaagctaaaag 2286
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 cgaaaatggccaatccttacgaacccatcagaatgggctacaagacgtccaaactaaaag 60
Query: 2287 ataaagagcacacc-tcgaggagcaggcgtcggcggacgaggcggaactcgtctaaccac 2345
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 ataaagagcacannntcgaggagcaggcgccggcggacgaggcggaactcgtctaaccac 120
Query: 2346 atagagaccaactcgaacgtagacaaaaacgctattttagtgcggaaagagaacacgata 2405
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 atagagaccaactcgaacgtagacaaaaacgccattttagtgcggaaagagaacacgata 180
Query: 2406 accctgcaagaaccgaaccgggacgacaacttcgcctggaaactacatctgaagacgctg 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accctgcaagaaccgaaccgggacgacaacttcgcctggaaactacatctgaagacgctg 240
Query: 2466 ctgtatgaaaaaatatgcctcgcgtacgccacgctagccgaatacagctactcacacgag 2525
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ctgtatgaaaaaatatgcctcgcgtacgccacgctagcggaatacagctactcacacgag 300
Query: 2526 cagtacggcttctccttgaagtatatagatctggccagcaaatgccagaagctgttgagc 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtacggcttctccttgaagtatatagatctggccagcaaatgccagaagctgttgagc 360
Query: 2586 aatatgatcatcaagagtcgcgtggtggacgccagctgtctcataggcagggtcggcgac 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatatgatcatcaagagtcgcgtggtggacgccagctgtctcataggcagggtcggcgac 420
Query: 2646 aactacttccaactgagcaaacactggcccagcttggaccagtacagcaaacagttcggc 2705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactacttccaactgagcaaacactggcccagcttggaccagtacagcaaacagttcggc 480
Query: 2706 atggaccacgagatcgatagggagataagaaacgagatagagagcgatatggcggaagaa 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggaccacgagatcgatagggagataagaaacgagatagagagcgatatggcggaagaa 540
Query: 2766 atggagggcttcgggggagatgagtttgaactgga 2800
|||||||||||||||||||||||||||||||||||
Sbjct: 541 atggagggcttcgggggagatgagtttgaactgga 575
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 533,284
Number of extensions: 14022
Number of successful extensions: 14022
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14021
Number of HSP's successfully gapped: 1
Length of query: 4345
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4327
Effective length of database: 8,109,745
Effective search space: 35090866615
Effective search space used: 35090866615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)