BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16822 (UTR included)
(2149 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B2G07 1417 0.0
>BF01023B2G07
Length = 755
Score = 1417 bits (715), Expect = 0.0
Identities = 745/755 (98%)
Strand = Plus / Plus
Query: 370 gtggtatcaccggctaaacttaattttcacaattatttaataatatggaaactgcttatt 429
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtggtatcaccggctaatcttaattttcacaattatttaataatatggaagctgcttatt 60
Query: 430 aaaaaattatttcataattttgagttcctattctgaatccaactttttaaacttacatta 489
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaatttatttcataattttgagttcctattctgaatccaactttttaaacttacatta 120
Query: 490 aaattatagacatggcagggttcgaggttagaatgtgcaatagccaaaagggtaagggcc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaattatagacatggcagggttcgaggttagaatgtgcaatagccaaaagggtaagggcc 180
Query: 550 tctttgccacaaaggagtttttgccgggagatgtaattttagaagaggaaccattggttt 609
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctttgctacaaaggagtttttgccgggagatgtaattttagaagaggaaccattggttt 240
Query: 610 cttgccagtttgctcataatgcggcatacagatatttagcctgtgaccattgtatgagac 669
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgtcagtttgctcataatgcggcatacagatatttagcctgtgaccattgtatgagac 300
Query: 670 cattagaaacaccagaacagaatgtgaggcgcttgtcagccaaacaggatatcattttac 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattagaaacaccagaacagaatgtgaggcgcttgtcagccaaacaggatatcattttac 360
Query: 730 cacattcaaactgttttgagactgatcttttaaatatcacgagctgcaatcaatgtggta 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacattcaaactgttttgagactgatcttttaaatatcacgagctgcaatcaatgtggta 420
Query: 790 tattatattgttcccaagaatgcaaggagatctcatatgcaacttatcaccggagcttgt 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tattatattgttcccaagaatgcaaggagatctcatatgcaacttatcaccggagcttgt 480
Query: 850 gttatatacaaagtgaagtcatgcatccaattagtgtgctcgtggagacttggaaacaaa 909
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttatatacaaaatgaagttatgcatccaattagtgtgctcgtggagacttggaaacaaa 540
Query: 910 tccattatcctcctgagactaccaacattatgttggttgttcgtttattggcatatatcc 969
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 541 tccattatcctcctgagactaccaacataatgttggttgttcgtttattggcatatatcc 600
Query: 970 agcaacacgatgatcctgccctagctgcagaaaatgtcaaacagttctgtcatagaacaa 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcaacacgatgatcctgccctagctgcagaaaatgtcaaacagttctgtcatagaacaa 660
Query: 1030 tcaatgaagatgcagagctggtacacaaattgttaggagaaaagttcagtgaccagttaa 1089
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 661 tcaatgaagatgctgagctggtacataaattgttaggagaaaagttcagtgaccagttaa 720
Query: 1090 atacattaagggaaatgacagctaatgttattaga 1124
|||||||||||||||||||||||||||||||||||
Sbjct: 721 atacattaagggaaatgacagctaatgttattaga 755
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,034
Number of extensions: 6045
Number of successful extensions: 6045
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6045
Number of HSP's successfully gapped: 1
Length of query: 2149
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2132
Effective length of database: 8,119,229
Effective search space: 17310196228
Effective search space used: 17310196228
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)