BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18630 (UTR included)
(2146 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B1B11 1380 0.0
>BF01021B1B11
Length = 808
Score = 1380 bits (696), Expect = 0.0
Identities = 705/708 (99%)
Strand = Plus / Plus
Query: 485 caggcagtagtacaagatgagtaaactttgtagacaagtgtcaatagaatccccagggcc 544
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 caggcagtagtgcaagatgagtaaactttgtagacaagtgtcaatagaatccccagggcc 160
Query: 545 cactcttaaagaatgtgtatttagttttgatgtacccgtgccagatgttccaatgtatgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cactcttaaagaatgtgtatttagttttgatgtacccgtgccagatgttccaatgtatgg 220
Query: 605 tgcaagaataagagttgtttacgctggtgcttgctatagagctaacagaactcgatcagc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tgcaagaataagagttgtttacgctggtgcttgctatagagctaacagaactcgatcagc 280
Query: 665 atcagtttgcagtacttcctccatttcctctattgggagtttgacaggggagatggaaag 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atcagtttgcagtacttcctccatttcctctattgggagtttgacaggggagatggaaag 340
Query: 725 ctttggcatacatacatcaacaccagctcatgttggcctacgcgatggtgctttgtttcc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctttggcatacatacatcaacaccagctcatgttggcctacgcgatggtgctttgtttcc 400
Query: 785 tgggtatgaagttgctggtattgtggatgaaattggtaaagcggcagaatgtacagatgg 844
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 401 tgggtatgaagttgctggtattgtggatgcaattggtaaagcggcagaatgtacagatgg 460
Query: 845 tattaaaataggaacaagaatagttctctacccaaatgatggtgttccgcatggatatgc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tattaaaataggaacaagaatagttctctacccaaatgatggtgttccgcatggatatgc 520
Query: 905 tgattacattgttgtcccagatttccattgcctagtgaaagtaccagagaatttgccact 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgattacattgttgtcccagatttccattgcctagtgaaagtaccagagaatttgccact 580
Query: 965 gagtattgcggctatgttgccaactggagctttacttgccatgaatactgttaatactgc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagtattgcggctatgttgccaactggagctttacttgccatgaatactgttaatactgc 640
Query: 1025 tattgagtgtctcaacactattattgaaggacctggcaaaaaggaaaaagcaactgtatt 1084
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 641 tattgagtgtctcaacactattattgaaggacctggcaaaaaggaaaaagtaactgtatt 700
Query: 1085 gattgttggaactggtggactagctctttgggcgcttcgtattgcgtctttctatttcca 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gattgttggaactggtggactagctctttgggcgcttcgtattgcgtctttctatttcca 760
Query: 1145 aagattaccctatcatgaacgaattcgtatatcagtggcaacattgaa 1192
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aagattaccctatcatgaacgaattcgtatatcagtggcaacattgaa 808
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,168
Number of extensions: 5121
Number of successful extensions: 5121
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5121
Number of HSP's successfully gapped: 1
Length of query: 2146
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2129
Effective length of database: 8,119,229
Effective search space: 17285838541
Effective search space used: 17285838541
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)