BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05607 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1C01 1419 0.0
>BF01055B1C01
Length = 846
Score = 1419 bits (716), Expect = 0.0
Identities = 747/758 (98%), Gaps = 7/758 (0%)
Strand = Plus / Plus
Query: 1015 tcttcaaacctgaaacccgaggtctaaaagaccccctccagatcgaaaaccttcaagatc 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 tcttcaaacctgaaacccgaggtctaaaagaccccctccagatcgaaaaccttcaagatc 88
Query: 1075 aagctcaagtgatgctaatgactcacacaaggacagctcacggcacggcccccgctcggt 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aagctcaagtgatgctaatgactcacacaaggacagctcacggcacggcccccgctcggt 148
Query: 1135 tcgggaggctcctacttcttctaccactcctccgcctcgtcacgccacagcaattggaga 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tcgggaggctcctacttcttctaccactcctccgcctcgtcacgccacagcaattggaga 208
Query: 1195 aggagttcttcgcgaaaaccattggagaaacacccatggaaaaagtactcgctgatatgt 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aggagttcttcgcgaaaaccattggagaaacacccatggaaaaagtactcgctgatatgt 268
Query: 1255 ataagaattaagaactagttgagaatacattttcaaaacatgtttgaaatatataaatga 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ataagaattaagaactagttgagaatacattttcaaaacatgtttgaaatatataaatga 328
Query: 1315 cagatgaca-------gttgtcagttgacagatgacagttgacagaagagatcagaaaat 1367
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cagatgacacttgtcagttgtcagttgacagatgacagttgacagaagagatcagaaaat 388
Query: 1368 atttgaacttaagtttagttgacattatggagggtagaattaaggagaaccatctcagtg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atttgaacttaagtttagttgacattatggagggtagaattaaggagaaccatctcagtg 448
Query: 1428 tattaaaaagtgtccgctgaaaagtagcaaattaagatagcgccatagtaccaaagggaa 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tattaaaaagtgtccgctgaaaagtagcaaattaagatagcgccatagtaccaaagggaa 508
Query: 1488 agattttaattttatttttataggttatatttactaaataatattggactacgtaagtag 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agattttaattttatttttataggttatatttactaaataatattggactacgtaagtag 568
Query: 1548 ttaagattttaaatattgcatatttcttaaaactacacaagtcacgacaagtattaaatt 1607
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttaagattttaaatattgcttatttcttaaaactacacaagtcacgacaagtattaaatt 628
Query: 1608 ttcaaccgaacacacttcactctgtttataactgctattttcatatcatttccttttgct 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttcaaccgaacacacttcactctgtttataactgctattttcatatcatttccttttgct 688
Query: 1668 acactagcgctagttctgtgagttttcgagtaataattagctgtttagaagtggacactt 1727
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 689 acactagcgctagttctgtgagttttcgagtaataattagctgtttacaagtggacactt 748
Query: 1728 ttttcaacttgtccccatacaaggtgcttctccttact 1765
||||||||||||||| |||||||||| |||||||||||
Sbjct: 749 ttttcaacttgtccctatacaaggtggttctccttact 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,332
Number of extensions: 5261
Number of successful extensions: 5261
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5260
Number of HSP's successfully gapped: 2
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)