BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16347 (UTR included)
(1834 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1E02 1354 0.0
>BF01011B1E02
Length = 702
Score = 1354 bits (683), Expect = 0.0
Identities = 695/699 (99%)
Strand = Plus / Plus
Query: 719 aatggagctggtacgtgacaagcgaggtaagggtattggagacaagttcgtatctggcac 778
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aatggagctggtacgtgacaagcgaggtaaggggattggagacaagttcgtatctggcac 60
Query: 779 attatttcctggctgggtttgggagtcttactgcgctattggcgtgttcacatttggtgc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatttcctggctgggtttgggagtcttactgcgctattggcgtgttcacatttggtgc 120
Query: 839 agcctgccaacaacttacagtcaattcagccaaatacgtcatcggaagattaagacctca 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcctgccaacaacttacagtcaattcagccaaatacgtcatcggaagattaagacctca 180
Query: 899 tttctttgatgtttgccagccaataccaaacaacgcttcaaatacaatgggctacatcca 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttctttgatgtttgccagccaataccaaacaacgcttcaaatacaatgggctacatcca 240
Query: 959 agacttcacctgtgtgggtgcggacgccgcccatctcaaggacatgaggctatcatttcc 1018
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 agacttcacctgtgtgggtgcggacgccgcccatctgaaggacatgaggctatcatttcc 300
Query: 1019 cagcgctcactccagcttcgctatgtacagcgctgtattcttcatattatacgttcaagt 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagcgctcactccagcttcgctatgtacagcgctgtattcttcatattatacgttcaagt 360
Query: 1079 gaagggtaagtggcgcgggtcaaagctcctccgccacgccgttcagttcgcggttctcat 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagggtaagtggcgcgggtcaaagctcctccgccacgccgttcagttcgcggttctcat 420
Query: 1139 ggccgcctggtatgtggggctttctcgtgtggtggaccatatgcaccactggagcgacgt 1198
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggccgcctggtacgtggggctttctcgtgtggtggaccatatgcaccactggagcgacgt 480
Query: 1199 ggcagtgggtttcgctgtcggagctgtgtacggaatcatagtgttcatatttgtattaaa 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcagtgggtttcgctgtcggagctgtgtacggaatcatagtgttcatatttgtattaaa 540
Query: 1259 accgaagaagtatggagatccaacatgggaaccgcctcctcctgagatgttgccacgacc 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accgaagaagtatggagatccaacatgggaaccgcctcctcctgagatgttgccacgacc 600
Query: 1319 cgtgctctcgagatgaataaaaaatggtcacctgctactccactatcatcatcacgacct 1378
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 cgtgctctcgagatgaataaaaaatggtcacctactactccactatcatcatcacgacct 660
Query: 1379 gatttcaaatatattaattaataataagacaaatatcta 1417
|||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatttcaaatatattaattaataataagacaaatatcta 699
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,194
Number of extensions: 4519
Number of successful extensions: 4519
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4519
Number of HSP's successfully gapped: 1
Length of query: 1834
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1817
Effective length of database: 8,119,229
Effective search space: 14752639093
Effective search space used: 14752639093
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)