BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09973 (UTR included)
(2267 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3010_C1 1096 0.0
BF01053B2H03 795 0.0
BF14_311_C1 109 2e-23
>BF14_3010_C1
Length = 1256
Score = 1096 bits (553), Expect = 0.0
Identities = 579/590 (98%)
Strand = Plus / Plus
Query: 38 aggcgtacggcctccgcacagtaggggtgtaccgcgtgccgggtaacgcggccggagtgg 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aggcgtacggcctccgcacagtaggggtgtaccgcgtgccgggtaacgcggccggagtgg 726
Query: 98 cggcgctggctgccgccctggaccgcggggagccgccccccgccgacgactcgcgctggg 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cggcgctggctgccgccctggaccgcggggagccgccccccgccgacgactcgcgctggg 786
Query: 158 cggacgtccacgtggcctccagtctgctcaaggcctacctgaggcgactgcccgatccca 217
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 787 cggacgtccacgtggcctccagtctgctcaaggcttacctgaggcgactgcccgatccca 846
Query: 218 ttctcaccgcacatctatatccagcttttattgcggctgatcgttcccccgagagagctc 277
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 847 tactcaccgcacatctatatccagcgtttattgcggctgatcgttcccccgagagagctc 906
Query: 278 gcgaactgcgcaagctcgtccacgccctgcccgacgctcactacgagacactaaagtacc 337
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 907 gcgaactgcgcaagctcgtccacgccctgcccgacgctcactatgagacactaaagtacc 966
Query: 338 tgatccaacatttgcgcaaagtggtcgcaaactccgcttataataaaatggaagcgagaa 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tgatccaacatttgcgcaaagtggtcgcaaactccgcttataataaaatggaagcgagaa 1026
Query: 398 acttggccatcgttttcgggccaacgttggtgcgcgcggccagcgacgacatgctggcga 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 acttggccatcgttttcgggccaacgttggtgcgcgcggccagcgacgacatgctggcga 1086
Query: 458 tggtcaacgacatgtccagtcagtgtcgtataatagaatccttcttaacacattacgaat 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 tggtcaacgacatgtccagtcagtgtcgtataatagaatccttcttaacacattacgaat 1146
Query: 518 ggtacttcgaagaggaagaaggctgtcctccgtcggagccccctccgccgggagacgccc 577
|||||||||| | ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1147 ggtacttcgangnnnaagaaggctgtcctccgtcggnnncccctccgccgggagacgccc 1206
Query: 578 tcacccccgcgcctgccccctcccgcgacctgctcatacataacgtcaag 627
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 tcacccccgcgcctgccccctcccgcgacctgctcatacataacgtcaag 1256
>BF01053B2H03
Length = 799
Score = 795 bits (401), Expect = 0.0
Identities = 413/417 (99%)
Strand = Plus / Plus
Query: 1345 gagaattccggccccaagaacggccccgacgacgacaaagatgtcgacacgcggtctcag 1404
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gagaattccggccccaagaacggccccgacgacgacaaagatgtcgatacgcggtctcag 63
Query: 1405 gcttccgccggggactcccccgacaacgatcgcagcgcggcctccgcgggcgagggtcca 1464
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gcctccgccggggactcccccgacaacgatcgcagcgcggcctccgcgggcgagggtcca 123
Query: 1465 cgtcgctccgagtcactcggccgcgtgctccgctccgagagcctcaactgccgcagcgac 1524
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 124 cgtcgctccgagtcactcggccgcgtgctccgctccgagagtctcaactgccgcagcgac 183
Query: 1525 cggccgcaacgctctgaatctctcagcaaggcggagcgcccgaccaagttggagaaaggc 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cggccgcaacgctctgaatctctcagcaaggcggagcgcccgaccaagttggagaaaggc 243
Query: 1585 gagtggaacgtggtgcgacgccgcgaggcgggcgcctggcgctccaccaagctcaagcgg 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gagtggaacgtggtgcgacgccgcgaggcgggcgcctggcgctccaccaagctcaagcgg 303
Query: 1645 aagaacggtatgccggagcgaggcatcaagcgccgccacacggtcggcggcaccaaggac 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aagaacggtatgccggagcgaggcatcaagcgccgccacacggtcggcggcaccaaggac 363
Query: 1705 ttcgacaaggacggctgggcggcgcgccacacgcgcacctcgtccccggacctgtcg 1761
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 364 ttcgacaaggacggctgggcggcgcggcacacgcgcacctcgtccccggacctgtcg 420
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1804 aaacgtattaattccctttatggtgcaaatgtaacggttgccggttatcttttgttgcgc 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaacgtattaattccctttatggtgcaaatgtaacggttgccggttatcttttgttgcgc 648
Query: 1864 gctaagtttgatacgacactgactcctcgaccgggagcgccgcgccggggaccgacccgc 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gctaagtttgatacgacactgactcctcgaccgggagcgccgcgccggggaccgacccgc 708
Query: 1924 gtgttcagagaggctatcgatcggtttgattttttgactgaatagattaagacgcaatca 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gtgttcagagaggctatcgatcggtttgattttttgactgaatagattaagacgcaatca 768
Query: 1984 taatattatataacgaacgaatacaat 2010
|||||||||||||||||||||||||||
Sbjct: 769 taatattatataacgaacgaatacaat 795
>BF14_311_C1
Length = 1205
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 2213 gaagaactgatggaacgcgtccatgaactaagctcactaaataatgccaaagaat 2267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaactgatggaacgcgtccatgaactaagctcactaaataatgccaaagaat 55
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 157,065
Number of extensions: 2752
Number of successful extensions: 2752
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2752
Number of HSP's successfully gapped: 4
Length of query: 2267
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2250
Effective length of database: 8,119,229
Effective search space: 18268265250
Effective search space used: 18268265250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)