BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01282 (UTR included)
(2524 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2182_C1 1834 0.0
>BF14_2182_C1
Length = 944
Score = 1834 bits (925), Expect = 0.0
Identities = 939/944 (99%)
Strand = Plus / Plus
Query: 465 tgagtcgctatcgcgcataatattaacaaaaacaaaatggcttcacgagacgctgcttcc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagtcgctatcgcgcataatattaacaaaaacaaaatggcttcacgagacgctgcttcc 60
Query: 525 gaccaacttgtaaacttcaagaaatccgttaaggattcccctggctatatgactacaaaa 584
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gaccaacttgtaaacttcaagaaatccgttagggattcccctggctatatgactacaaaa 120
Query: 585 tatggtacaccaattggagtcaagactgctattcaaactgttggaaaaaatggacctgct 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatggtacaccaattggagtcaagactgctattcaaactgttggaaaaaatggacctgct 180
Query: 645 ttacttcaagatgctcagttcctagatgaaatatcatcatttgatagagagcgcattcct 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttacttcaagatgctcagttcctagatgaaatatcatcatttgatagagagcgcattcct 240
Query: 705 gaaagagtagttcatgccaagggagctggagcctttggttattttgaagttacccatgat 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaagagtagttcatgccaagggagctggagcctttggttattttgaagttacccatgat 300
Query: 765 atttcaaaatattctgctgccaaggtttttgagaacattggcaagaaaacacctatagca 824
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 atttcaaaatattctgctgccaaggtttttgaaaacattggcaagaaaacacctatagca 360
Query: 825 gtcagattctccactgtaggaggtgagagtggatcagctgacactgtcagagatccccgt 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcagattctccactgtaggaggtgagagtggatcagctgacactgtcagagatccccgt 420
Query: 885 ggatttgctgtcaaattctacactgatgatggtatctgggaccttgttggtaacaacact 944
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 ggatttgctgtcaaattctacactgacgatggtatctgggaccttgttggtaacaacact 480
Query: 945 ccaattttcttcattagagatccaactctgttccctagctttattcacacacagaagaga 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaattttcttcattagagatccaactctgttccctagctttattcacacacagaagaga 540
Query: 1005 aatcctgctacccacttaaaagatgccgatatgttctgggactttatgactttaagacct 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatcctgctacccacttaaaagatgccgatatgttctgggactttatgactttaagacct 600
Query: 1065 gaaaccatgcaccaattggtgtatttatttggtgacagaggtattcctgatggttataga 1124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaaaccatgcaccaattggtatatttatttggtgacagaggtattcctgatggttataga 660
Query: 1125 ttcatgaatggttatggatctcatacctttaaacttgtaaatgctcaaggagttgctcac 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcatgaatggttatggatctcatacctttaaacttgtaaatgctcaaggagttgctcac 720
Query: 1185 tgggttaaattccactacaagtctaaccaaggaatcaagaacttgcctgtggataaagct 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgggttaaattccactacaagtctaaccaaggaatcaagaacttgcctgtggataaagct 780
Query: 1245 gctgaattagcttcctctgatcctgactactctattagagatttatacaatgcaattggt 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctgaattagcttcctctgatcctgactactctattagagatttatacaatgcaattggt 840
Query: 1305 aaaggagaatttccaacatggactctatacattcaagtcatgacaatggctcaaggagaa 1364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 841 aaaggagaatttccaacatggactctatacattcaagtcatgacaatggctcaaggagna 900
Query: 1365 aactgcaaattcaatccattcgacctaactaaagtctggcccca 1408
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aactgcaaattcaatccattcgacctaactaaagtctggcccca 944
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,595
Number of extensions: 6097
Number of successful extensions: 6097
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6097
Number of HSP's successfully gapped: 1
Length of query: 2524
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2507
Effective length of database: 8,119,229
Effective search space: 20354907103
Effective search space used: 20354907103
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)