BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN14665 (UTR included)
(8281 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1A07 442 e-123
BF14_3046_C1 94 4e-18
BF01024A2B03 78 3e-13
BF01044A1D01 76 1e-12
BF01049B2B11 74 4e-12
>BF01044B1A07
Length = 806
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Minus
Query: 7151 aggtcgccagtcatccccgtaccaggaggtgacgatctaccgcaactacttcacccgcaa 7210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggtcgccagtcatccccgtaccaggaggtgacgatctaccgcaactacttcacccgcaa 325
Query: 7211 ccaggccttgtaccgagacgtcatcgttcttcatcaggtcgtctccaacttcagccacaa 7270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaggccttgtaccgagacgtcatcgttcttcatcaggtcgtctccaacttcagccacaa 265
Query: 7271 ctacgtccaccacaacaccggcctcaggattctcgacgtgtccggcttccacaaagtccg 7330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacgtccaccacaacaccggcctcaggattctcgacgtgtccggcttccacaaagtccg 205
Query: 7331 cctgcccatctaccagaccacgtcacacaacggattctacaag 7373
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cctgcccatctaccagaccacgtcacacaacggattctacaag 162
>BF14_3046_C1
Length = 1016
Score = 93.7 bits (47), Expect = 4e-18
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 8170 tataattcgtccagtaaataaaaacgttgacattgacaaaatattccacgattccagtgc 8229
|||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 941 tataattcctccaacaaataaaaacgttgacattggcaaaatattccacgattccagtgc 1000
Query: 8230 gaa 8232
|||
Sbjct: 1001 gaa 1003
>BF01024A2B03
Length = 724
Score = 77.8 bits (39), Expect = 3e-13
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 8170 tataattcgtccagtaaataaaaacgttgacattgacaaaatattccacgattccagtg 8228
|||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 250 tataattcgtcctacaaataaaaacgttgacattggcaaaatattcaacgattccagtg 308
>BF01044A1D01
Length = 742
Score = 75.8 bits (38), Expect = 1e-12
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 8186 aataaaaacgttgacattgacaaaatattccacgattccagtgcgaataaagcc 8239
||||||||||||||||||| || ||||||||||||||||||||| ||| |||||
Sbjct: 246 aataaaaacgttgacattggcagaatattccacgattccagtgcaaatgaagcc 193
>BF01049B2B11
Length = 780
Score = 73.8 bits (37), Expect = 4e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 8170 tataattcgtccagtaaataaaaacgttgacattgacaaaatattccacgattccagtgc 8229
|||||||| |||| |||||||||||| |||||| ||||||||||||||||||||| ||
Sbjct: 16 tataattcatccaacaaataaaaacgtcgacattagcaaaatattccacgattccagagc 75
Query: 8230 gaataaagc 8238
|||| ||||
Sbjct: 76 gaatgaagc 84
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 126,196
Number of extensions: 14851
Number of successful extensions: 14851
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 14851
Number of HSP's successfully gapped: 5
Length of query: 8281
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8263
Effective length of database: 8,109,745
Effective search space: 67010822935
Effective search space used: 67010822935
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)