BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15764 (UTR included)
(2491 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1496_C1 626 e-179
>BF14_1496_C1
Length = 1077
Score = 626 bits (316), Expect = e-179
Identities = 338/343 (98%), Gaps = 3/343 (0%)
Strand = Plus / Plus
Query: 2152 gcacgttatatcttcatggacattatttctaagtacacagatctaaccgtgagcatggac 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcacgttatatcttcatggacattatttctaagtacacagatctaaccgtgagcatggac 61
Query: 2212 atgtgttcggggcgttgtgttcacagttcacgcaactcgtgactatattgagtgattcgg 2271
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 atgtgttcggggcgttgggttcacggttcacgcaactcgtgactatattgagtgattcgg 121
Query: 2272 ttcgcggtgtttaaaattaa--ttttgttataattttacctgatatcttcgtattgcact 2329
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcgcggtgtttaaaattaaaattttgttataattttacctgatatcttcgtattgcact 181
Query: 2330 gaatgtttccttagttaccataatgccgcccatacgtatttaatataaaaatattatgta 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaatgtttccttagttaccataatgccgcccatacgtatttaatataaaaatattatgta 241
Query: 2390 attttgaagtcatgaaaactaaaaggatgcctcggttatttatatattttttaattagtg 2449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 attttgaagtcatgaaaactaaaaggatgcctcggttatttatatattttttaattagtg 301
Query: 2450 aactcaaatgta-tgctgagattataaaataaggaattgagca 2491
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 302 aactcaaatgtattgctgagattataaaataaggaattgagca 344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,170
Number of extensions: 5284
Number of successful extensions: 5284
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5282
Number of HSP's successfully gapped: 1
Length of query: 2491
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2474
Effective length of database: 8,119,229
Effective search space: 20086972546
Effective search space used: 20086972546
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)