BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18204 (UTR included)
(2617 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E11 196 1e-49
BF14_2430_C1 133 2e-30
BF14_1645_C1 121 6e-27
BF14_1695_C1 82 5e-15
BF01051A1D12 80 2e-14
>BF01025B1E11
Length = 786
Score = 196 bits (99), Expect = 1e-49
Identities = 144/159 (90%)
Strand = Plus / Minus
Query: 2036 tccgtgcaaagacgtacacagtatattctgccagtgtcctgtagaatggaggagacacga 2095
||||||||| ||||| |||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 254 tccgtgcaaggacgtgcacaatatattctgccagtatcgtgtagaatggaggaaacacga 195
Query: 2096 tccgggattaacttttgactgaaataaaatataacaatcgtgactgaagtcacaattagg 2155
|||||||||||||||||| ||||||||||| | ||| | |||||||||||||||||||
Sbjct: 194 tccgggattaacttttgaatgaaataaaattttacagccccgactgaagtcacaattagg 135
Query: 2156 aactttgttagtagatctaaaagaacacaaattcaatta 2194
|||||||||||||||||||||| || |||||||||||||
Sbjct: 134 aactttgttagtagatctaaaacaagacaaattcaatta 96
>BF14_2430_C1
Length = 830
Score = 133 bits (67), Expect = 2e-30
Identities = 112/127 (88%)
Strand = Plus / Minus
Query: 2038 cgtgcaaagacgtacacagtatattctgccagtgtcctgtagaatggaggagacacgatc 2097
|||||||||| || |||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 216 cgtgcaaagatgtgcacagtatattctgccagtgtcgtgtagaatggaggaaacacgatc 157
Query: 2098 cgggattaacttttgactgaaataaaatataacaatcgtgactgaagtcacaattaggaa 2157
|||||||||||| ||| | ||||| || ||||| | ||||||||| |||||||||||
Sbjct: 156 cgggattaacttatgaatacaataagatttaacagcctcgactgaagtaacaattaggaa 97
Query: 2158 ctttgtt 2164
|||||||
Sbjct: 96 ctttgtt 90
>BF14_1645_C1
Length = 793
Score = 121 bits (61), Expect = 6e-27
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 2037 ccgtgcaaagacgtacacagtatattctgccagtgtcctgtagaatggaggagacacgat 2096
|||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 167 ccgtgccaagacgtgcacagtatattctgccagtgtcgtgtagaatggaggaggcacgat 108
Query: 2097 ccgggattaacttttga 2113
|||||||||||||||||
Sbjct: 107 ccgggattaacttttga 91
>BF14_1695_C1
Length = 1407
Score = 81.8 bits (41), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 2036 tccgtgcaaagacgtacacagtatattctgccagtgtcctgtagaatggagga 2088
||||||||||||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 1225 tccgtgcaaagacgtgcacagtatattctgccagtgtcatgtagaatgaagga 1173
>BF01051A1D12
Length = 812
Score = 79.8 bits (40), Expect = 2e-14
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 2036 tccgtgcaaagacgtacacagtatattctgccagtgtcctgtagaatggaggagacacga 2095
||||||||| ||||| ||||| ||||||||||||||| ||||| || || ||||||||
Sbjct: 279 tccgtgcaaggacgtgtacagtctattctgccagtgtcgtgtagcatagattagacacga 220
Query: 2096 tccgggattaacttttgactgaaataaaatataacaatcgtgactgaagtcacaattagg 2155
|||||||||||||| | || |||||||| ||||| ||||| || |||||| |||
Sbjct: 219 tccgggattaacttagaaatggaataaaatttaacagcttcgactggagacacaatcagg 160
Query: 2156 aactttgttagtagat 2171
||||||| ||||||||
Sbjct: 159 aactttggtagtagat 144
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,575
Number of extensions: 4822
Number of successful extensions: 4822
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 4820
Number of HSP's successfully gapped: 5
Length of query: 2617
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2600
Effective length of database: 8,119,229
Effective search space: 21109995400
Effective search space used: 21109995400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)