BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01451 (UTR included)
(3652 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1A10 1453 0.0
BF01047B1C12 1340 0.0
BF01051B2C07 365 e-100
>BF01060A1A10
Length = 753
Score = 1453 bits (733), Expect = 0.0
Identities = 748/753 (99%)
Strand = Plus / Plus
Query: 2096 ctggactctccccgcgctctcgtcgctaccgttccgtctggcagcgggcacgtctccacc 2155
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 ctggactctctccgcgctcttgtcgctaccgttccgtctggcagcgggcacgtctccatc 60
Query: 2156 gccgcagaccgccgccgcactccacgccgcgggctcgaccctgccggccctgcagacggc 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccgcagaccgccgccgcactccacgccgcgggctcgaccctgccggccctgcagacggc 120
Query: 2216 gtatctggcgctcaactccatcaacatgttcgtgcccatcatgggtcgcgccggcacggc 2275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtatctggcgctcaactccatcaacatgttcgtgcccatcatgggtcgcgccggcacggc 180
Query: 2276 cttcttgccggcagacgtgatgatgtccgtggtggtgtcgtccctgaccctgctcacctt 2335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcttgccggcagacgtgatgatgtccgtggtggtgtcgtccctgaccctgctcacctt 240
Query: 2336 cagttggatgctgccactcgtggtcgccgcgaagagactcaacgttctgctgtacgcggt 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagttggatgctgccactcgtggtcgccgcgaagagactcaacgttctgctgtacgcggt 300
Query: 2396 gctggccgccagctgtgtgggcgccttgtactcgctcagtcccttgggcgcgccgtacag 2455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctggccgccagctgtgtgggcgccttgtactcgctcagtcccttgggcgcgccgtacag 360
Query: 2456 tgagacgcgcccccagcgtctgatggtgttccacactcgtcgctcgtacactcctctggg 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgagacgcgcccccagcgtctgatggtgttccacactcgtcgctcgtacactcctctggg 420
Query: 2516 cgccggcgaccccgtctccctggaggacttcttctggatgccggagttggacgtcaacac 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgccggcgaccccgtctccctggaggacttcttctggatgccggagttggacgtcaacac 480
Query: 2576 gccacactcaatggacaaatacatcgagggcgtgtccgcggcgcgcgtcacggcggccga 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccacactcaatggacaaatacatcgagggcgtgtccgcggcgcgcgtcacggcggccga 540
Query: 2636 ggagtgttcgcgctgggcctactgcggcgcaccttactttctgcccgtgctgtcgcgcgt 2695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggagtgttcgcgctgggcctactgcggcgcaccttactttctgcccgtgctgtcgcgcgt 600
Query: 2696 atcgcgaggatactccatgccggcgccggagccccccctgccgcggctgcgggtggcttc 2755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcgcgaggatactccatgccggcgccggagccccccctgccgcggctgcgggtggcttc 660
Query: 2756 gcgcctgctggtcgcggacggtgaccccggcagccgcacgttgcagctggacctgtcggg 2815
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 661 gcgcctgctggttgcggacggtgaccccggcagccgcatgttgcagctggacctgtcggg 720
Query: 2816 cacacaacacgccgtgctggtgttggcaccggc 2848
|||||||||||||||||||||||||||||||||
Sbjct: 721 cacacaacacgccgtgctggtgttggcaccggc 753
>BF01047B1C12
Length = 684
Score = 1340 bits (676), Expect = 0.0
Identities = 682/684 (99%)
Strand = Plus / Plus
Query: 799 agctggtgtcggcagcccgctctgtggccgccgccgccagcccacacaacctcgttgact 858
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctggtgtcggcagcccgctccgtggccgccgccgccagcccacacaacctcgttgact 60
Query: 859 acgacgtgttcaccgccagcggtgccttctcgctcaccttcctcgacggcatgactaaca 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgacgtgttcaccgccagcggtgccttctcgctcaccttcctcgacggcatgactaaca 120
Query: 919 tctatcgagacgttcagagcgtcgtgattcggatcagaggcgcgggggaggcgagcggcc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctatcgagacgttcagagcgtcgtgattcggatcagaggcgcgggggaggcgagcggcc 180
Query: 979 cggggagggggtctgcgcgagcacccgccgctctactcatcaactgccacttcgacaccg 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggggagggggtctgcgcgagcacccgccgctctactcatcaactgccacttcgacaccg 240
Query: 1039 tgcctgacagtcctggggccagcgacgacggcgcgggctgtgcagtggcgctggagacgg 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcctgacagtcctggggccagcgacgacggcgcgggctgtgcagtggcgctggagacgg 300
Query: 1099 cccgggccctcgccgccgcgccgaggccgctgagacatcgcgtgctggtgttgttgaatg 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccgggccctcgccgccgcgccgaggccgctgagacatcgcgtgctggtgttgttgaatg 360
Query: 1159 gtgcggaggagaacatcctgcaagcgagccacgccttcgtcaccagccacgcctgggcgc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgcggaggagaacatcctgcaagcgagccacgccttcgtcaccagccacgcctgggcgc 420
Query: 1219 gaggagcgcgggccttcatcaacatcgaggcgtgtggcgccgggggccgcgaggtgctgt 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaggagcgcgggccttcatcaacatcgaggcgtgtggcgccgggggccgcgaggtgctgt 480
Query: 1279 ttcaggccggcccgcacgacccctggatagtggaggtgtacgcgggggcggtgccgcacc 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcaggccggcccgcacgacccctggatagtggaggtgtacgcgggggcggtgccgcacc 540
Query: 1339 ccttcgcctcttcgctggcgcaggagctgttcgagagcggcctcatccccgcagacaccg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccttcgcctcttcgctggcgcaggagctgttcgagagcggcctcatccccgcagacaccg 600
Query: 1399 acttccgtatattccgagatttcgggaacatgtccggcgtggatctcgcgtggagcagca 1458
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acttccgtattttccgagatttcgggaacatgtccggcgtggatctcgcgtggagcagca 660
Query: 1459 acgggtacgtgtaccacacgcggc 1482
||||||||||||||||||||||||
Sbjct: 661 acgggtacgtgtaccacacgcggc 684
>BF01051B2C07
Length = 217
Score = 365 bits (184), Expect = e-100
Identities = 187/188 (99%)
Strand = Plus / Plus
Query: 3256 ttccctcggcaccgtcggggcgcgagctcgttgtaacgactcgagttcaaaattagagga 3315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccctcggcaccgtcggggcgcgagctcgttgtaacgactcgagttcaaaattagagga 60
Query: 3316 aataatatttgaaaaccgttttgaagtctgtttgtctcgtcacagagcgcgggaggggaa 3375
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 aataatatttgaaaaccgttttgaagtctgttcgtctcgtcacagagcgcgggaggggaa 120
Query: 3376 tggacctgttactgtgatgtaatattatatttctgtttttcaattataaatagcaacatt 3435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggacctgttactgtgatgtaatattatatttctgtttttcaattataaatagcaacatt 180
Query: 3436 ttataaaa 3443
||||||||
Sbjct: 181 ttataaaa 188
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,479
Number of extensions: 6843
Number of successful extensions: 6843
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6843
Number of HSP's successfully gapped: 3
Length of query: 3652
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3634
Effective length of database: 8,109,745
Effective search space: 29470813330
Effective search space used: 29470813330
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)