BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16408 (UTR included)
(2917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3509_C1 1939 0.0
>BF14_3509_C1
Length = 1006
Score = 1939 bits (978), Expect = 0.0
Identities = 999/1006 (99%)
Strand = Plus / Plus
Query: 1848 atcaccgacggctatttgaaccagaagatggttgctgacgtcgtaggggattatttcttc 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaccgacggctatttgaaccagaagatggttgctgacgtcgtaggggattatttcttc 60
Query: 1908 gtgtgcccaacaaattattttgctgaaattctcgctgattctggtgttgacgtttactat 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtgcccaacaaattattttgctgaaattctcgctgattctggtgttgacgtttactat 120
Query: 1968 tactattttacacacagaactagtacaagtccttggggtgaatggatgggagtgattcat 2027
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactactttacacacagaaccagtacaagtccttggggtgaatggatgggagtgattcat 180
Query: 2028 ggggatgaagtggaatatgtcttcgggcatcccctgaacatatctttacagtaccatact 2087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggggatgaagtggaatatgtcttcgggcatcccctgaacatatctttacagtaccatact 240
Query: 2088 cgtgaacgtgacctggcttctcacataatgcaatcattcaccagatttgctttaaccggt 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaacgtgacctggcttctcacataatgcaatcattcaccagatttgctttaaccggt 300
Query: 2148 aaacctcacaagcctgatgaaaaatggccactttactctcggacagcccctcactattac 2207
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacctcacaagcctgatgagaaatggccactttactctcggacagcccctcactattac 360
Query: 2208 acttacacagctgatggccccagtggcccggccggcccgcgtggtccccgagcttccgcc 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttacacagctgatggccccagtggcccggccggcccgcgtggtccccgagcttccgcc 420
Query: 2268 tgcgccttctggaacgacttcctcaacaagcttaatgaactggagcacgtgccatgtgat 2327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcgccttctggaacgacttcctcaacaagcttaatgaactggagcacgtgccatgtgat 480
Query: 2328 ggagccgtcaccggaccatatagcagcgtcgctggcactacgctacccatcgtactacta 2387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggagccgtcaccggaccatatagcagcgtcgctggcactacgctacccatcgtactacta 540
Query: 2388 actactcttgcgatttctgtagcactttaaacaaatagaaaaaactcccgtgataatggc 2447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actactcttgcgatttctgtagcactttaaacaaatagaaaaaactcccgtgataatggc 600
Query: 2448 ctcggcgtagggctcccactgtgaaatattatataatcacctatatcttataattaagtt 2507
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 601 ctcggcgtagggctcccactgtgaaattatatataatcacctatatcttataattaagtt 660
Query: 2508 tatgaaaatggcactgaaactttaagatacgattttttcattattgactggtacagttat 2567
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 tatgaaaatggcactgaaactttaagatacgatttttccattattgactggtacagttat 720
Query: 2568 caaagatggggtagactatttctcactagcatcccttattattagtctgcaataaacttg 2627
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caaagatggggtagactgtttctcactagcatcccttattattagtctgcaataaacttg 780
Query: 2628 taatgcaatttaatgtggtaagggaacacctccttacttaattattttgtaatttttgtc 2687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taatgcaatttaatgtggtaagggaacacctccttacttaattattttgtaatttttgtc 840
Query: 2688 tttacttgtaagggatctattggttgagataaaacacataacaatacgaggtgtagatat 2747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tttacttgtaagggatctattggttgagataaaacacataacaatacgaggtgtagatat 900
Query: 2748 tgtggacagctgaacattttctcatattgttgtttgtgaacatcttagctaaatagtagc 2807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tgtggacagctgaacattttctcatattgttgtttgtgaacatcttagctaaatagtagc 960
Query: 2808 taaaatgttcctctacccagtagacatgtaggtattgtatatcgag 2853
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 taaaatgttcctctacccagtagacatgtaggtattgtatatcgag 1006
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,490
Number of extensions: 5845
Number of successful extensions: 5845
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5845
Number of HSP's successfully gapped: 1
Length of query: 2917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2899
Effective length of database: 8,109,745
Effective search space: 23510150755
Effective search space used: 23510150755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)