BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN21267 (UTR included)
         (6490 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_2344_C1                                                         1021   0.0  

>BF14_2344_C1
          Length = 1237

 Score = 1021 bits (515), Expect = 0.0
 Identities = 540/546 (98%), Gaps = 3/546 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5947 acgtagcatgcactttggagggcgaccccgcagctgtgtgctgactatatgataccgtga 6006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    acgtagcatgcactttggagggcgaccccgcagctgtgtgctgactatatgataccgtga 60

                                                                        
Query: 6007 gttacgatttaattgcatttacataacttattatatattttgtacaaagagctttaattt 6066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gttacgatttaattgcatttacataacttattatatattttgtacaaagagctttaattt 120

                                                                        
Query: 6067 attctgaaaa--aaaaaatactcagatttaaatccgtttgtaaaaaaagactgtaaagta 6124
            ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  attctgaaaaaaaaaaaatactcagatttaaatccgtttgtaaaaaaagactgtaaagta 180

                                                                        
Query: 6125 acgattccaatactagtttaacaatatgatgttgaataatacttatttcgcagtggactt 6184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  acgattccaatactagtttaacaatatgatgttgaataatacttatttcgcagtggactt 240

                                                                        
Query: 6185 taatgataattaatataagtatttaaggtgttatttgatgctactacttatttaatgtta 6244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  taatgataattaatataagtatttaaggtgttatttgatgctactacttatttaatgtta 300

                                                                        
Query: 6245 ttaaatgtcataatttttctagagatcgctatcttaacatacttttttttttaaattaaa 6304
            ||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||
Sbjct: 301  ttaaatgtcataatttttctagagaacgctatcttaacat-ttttttttttttaattaaa 359

                                                                        
Query: 6305 agccgtctcccagtggccatatattattatgtttgtattgccatttctaatttgtaagtt 6364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360  agccgtctcccagtggccatatattattatgtttgtattgccatttctaatttgtaagtt 419

                                                                        
Query: 6365 taaagtaatctctctcagaactgtaagttgtcttttgtttccttaacatagatctggcac 6424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  taaagtaatctctctcagaactgtaagttgtcttttgtttccttaacatagatctggcac 479

                                                                        
Query: 6425 tgatattaatgtacatttattcgtgtatgccgctaatatacttaatattgatgtgtatta 6484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  tgatattaatgtacatttattcgtgtatgccgctaatatacttaatattgatgtgtatta 539

                  
Query: 6485 ttgttc 6490
            ||||||
Sbjct: 540  ttgttc 545


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 138,047
Number of extensions: 15221
Number of successful extensions: 15221
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15219
Number of HSP's successfully gapped: 1
Length of query: 6490
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6472
Effective length of database: 8,109,745
Effective search space: 52486269640
Effective search space used: 52486269640
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)