BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20284 (UTR included)
(1429 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1B01 1542 0.0
>BF01056A1B01
Length = 816
Score = 1542 bits (778), Expect = 0.0
Identities = 810/820 (98%), Gaps = 8/820 (0%)
Strand = Plus / Plus
Query: 429 gctacaattactatttctcgctgattctttaaatttatatttggaatttggattaccaaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctacaattactatttctcgctgattctttaaatttatatttggaatttggattaccaaa 60
Query: 489 agacttttaacgatggattctttacgtgaacaagttatgataaaccaatttgtattagcg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacttttaacgatggattctttacgtgaacaagttatgataaaccaatttgtattagcg 120
Query: 549 gctggatgtgcacgggaacaagctaaacaactcctacaagctgcacattggcaatttgag 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctggatgtgcacgggaacaagctaaacaactcctacaagctgcacattggcaatttgag 180
Query: 609 acagccctatcgatatttttccaagaggttgcaattccttccggagctaatggtattgct 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ----ccctatcgatatttttccaagaggttgcaattccttccggagctaatggtattgct 236
Query: 669 gctccatatcatcagcaattaatgacaccgtgcaatactccagcgactccaccaaacttc 728
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 237 gctccatatcatcagcaattaatgacgccgtgcaatacgccagcgactccaccaaacttc 296
Query: 729 cctgaagctttagccgcattctcccgattatcaacggggagcccaagccaggcgggtggg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cctgaagctttagccgcattctcccgattatcaacggggagcccaagccaggcgggtggg 356
Query: 789 acgagtgggatggctcctcccgtatcacctttagcgacccacccaccacagaatacttac 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 acgagtgggatggctcctcccgtatcacctttagcgacccacccaccacagaatacttac 416
Query: 849 aatggagcgactaactcccaagcaaactatgcgccactatcctgttcaactgctatttgc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatggagcgactaactcccaagcaaactatgcgccactatcctgttcaactgctatttgc 476
Query: 909 agagaacacatgcccagataagctgaggacttagtttaggattgtctgtaatttattttt 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agagaacacatgcccagataagctgaggacttagtttaggattgtctgtaatttattttt 536
Query: 969 ctaatggtgcgcgatgtaagctgtggacttgtgaatattattttatacaccccactgcag 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ctaatggtgcgcgatgtaagctgtggacttgtgaatattattttatacaccccactgcag 596
Query: 1029 ctagtttgctggacaatatacggggtgctatagtcaatcatgttaaacataaaatattct 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctagtttgctggacaatatacggggtgctatagtcaatcatgttaaacataaaatattct 656
Query: 1089 cactgttcataaaatagtggtttctaaaacaaaatgcactatagaataatattaattatg 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cactgttcataaaatagtggtttctaaaacaaaatgcactatagaataatattaattatg 716
Query: 1149 ttacatttttgatacctatg----aaaaaaaaaaaatctaacactgtgattataaaattt 1204
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttacatttttgatacctatgaaaaaaaaaaaaaaaatctaacactgtgattataaaattt 776
Query: 1205 ggtatcattactatgtagaaataataattattgctgtatg 1244
||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ggtatcattactatgtagaaataataattattgctgtatg 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,376
Number of extensions: 33828
Number of successful extensions: 33828
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 33823
Number of HSP's successfully gapped: 1
Length of query: 1429
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1412
Effective length of database: 8,119,229
Effective search space: 11464351348
Effective search space used: 11464351348
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)